PDB entry 4dut
View 4dut on RCSB PDB site
Description: The structure of nucleoside diphosphate kinase (NDK) from Burkholderia thailandensis
Class: transferase
Keywords: SSGCID, Seattle Structural Genomics Center for Infectious Disease, NIAID, National Institute of Allergy and Infectious Diseases, TRANSFERASE
Deposited on
2012-02-22, released
2012-03-07
The last revision prior to the SCOPe 2.07 freeze date was dated
2013-10-30, with a file datestamp of
2013-10-25.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.214
AEROSPACI score: 0.25
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Nucleoside diphosphate kinase
Species: Burkholderia thailandensis [TaxId:271848]
Gene: ndk, BTH_I2231
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d4duta_ - Chain 'B':
Compound: Nucleoside diphosphate kinase
Species: Burkholderia thailandensis [TaxId:271848]
Gene: ndk, BTH_I2231
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d4dutb_ - Heterogens: SO4, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4dutA (A:)
gpgsmalertlsiikpdavaknvigqiysrfenaglkivaarmahlsradaekfyavhae
rpffkdlvefmisgpvmiqvlegedailknrdlmgatdpkkaekgtiradfadsidanav
hgsdapetarveiafffpemnvysr
Sequence, based on observed residues (ATOM records): (download)
>4dutA (A:)
alertlsiikpdavaknvigqiysrfenaglkivaarmahlsradaekfyavhaerpffk
dlvefmisgpvmiqvlegedailknrdlmgatdpkkaekgtiradfadsidanavhgsda
petarveiafffpemnvysr
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4dutB (B:)
gpgsmalertlsiikpdavaknvigqiysrfenaglkivaarmahlsradaekfyavhae
rpffkdlvefmisgpvmiqvlegedailknrdlmgatdpkkaekgtiradfadsidanav
hgsdapetarveiafffpemnvysr
Sequence, based on observed residues (ATOM records): (download)
>4dutB (B:)
lertlsiikpdavaknvigqiysrfenaglkivaarmahlsradaekfyakdlvefmisg
pvmiqvlegedailknrdlmgatdpkkaekgtiradfadsidanavhgsdapetarveia
fffpemnvysr