PDB entry 4dqx

View 4dqx on RCSB PDB site
Description: Crystal structure of a short chain dehydrogenase from Rhizobium etli CFN 42
Class: oxidoreductase
Keywords: Structural Genomics, PSI-Biology, New York Structural Genomics Research Consortium, NYSGRC, OXIDOREDUCTASE
Deposited on 2012-02-16, released 2012-02-29
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-15, with a file datestamp of 2017-11-10.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Probable oxidoreductase protein
    Species: Rhizobium etli [TaxId:347834]
    Gene: RHE_PD00113
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8KL31 (22-End)
      • expression tag (21)
    Domains in SCOPe 2.08: d4dqxa1, d4dqxa2
  • Chain 'B':
    Compound: Probable oxidoreductase protein
    Species: Rhizobium etli [TaxId:347834]
    Gene: RHE_PD00113
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4dqxb_
  • Chain 'C':
    Compound: Probable oxidoreductase protein
    Species: Rhizobium etli [TaxId:347834]
    Gene: RHE_PD00113
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8KL31 (22-End)
      • expression tag (20-21)
    Domains in SCOPe 2.08: d4dqxc1, d4dqxc2
  • Chain 'D':
    Compound: Probable oxidoreductase protein
    Species: Rhizobium etli [TaxId:347834]
    Gene: RHE_PD00113
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8KL31 (22-End)
      • expression tag (20-21)
    Domains in SCOPe 2.08: d4dqxd1, d4dqxd2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4dqxA (A:)
mhhhhhhssgvdlgtenlyfqsmdlnqrvcivtgggsgigrataelfakngayvvvadvn
edaavrvaneigskafgvrvdvssakdaesmvekttakwgrvdvlvnnagfgttgnvvti
peetwdrimsvnvkgiflcskyvipvmrrngggsiinttsytatsaiadrtayvaskgai
ssltramamdhakegirvnavapgtidspyftkifaeakdpaklrsdfnaravmdrmgta
eeiaeamlflasdrsrfatgsiltvdggssignhlvk

    Sequence, based on observed residues (ATOM records): (download) 
    >4dqxA (A:)
smdlnqrvcivtgggsgigrataelfakngayvvvadvnedaavrvaneigskafgvrvd
vssakdaesmvekttakwgrvdvlvnnagfgttgnvvtipeetwdrimsvnvkgiflcsk
yvipvmrrngggsiinttsytatsaiadrtayvaskgaissltramamdhakegirvnav
apgtidspyftkifaeakdpaklrsdfnaravmdrmgtaeeiaeamlflasdrsrfatgs
iltvdggssignhlv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4dqxB (B:)
mhhhhhhssgvdlgtenlyfqsmdlnqrvcivtgggsgigrataelfakngayvvvadvn
edaavrvaneigskafgvrvdvssakdaesmvekttakwgrvdvlvnnagfgttgnvvti
peetwdrimsvnvkgiflcskyvipvmrrngggsiinttsytatsaiadrtayvaskgai
ssltramamdhakegirvnavapgtidspyftkifaeakdpaklrsdfnaravmdrmgta
eeiaeamlflasdrsrfatgsiltvdggssignhlvk

    Sequence, based on observed residues (ATOM records): (download) 
    >4dqxB (B:)
mdlnqrvcivtgggsgigrataelfakngayvvvadvnedaavrvaneigskafgvrvdv
ssakdaesmvekttakwgrvdvlvnnagfgttgnvvtipeetwdrimsvnvkgiflcsky
vipvmrrngggsiinttsytatsaiadrtayvaskgaissltramamdhakegirvnava
pgtidspyftkifadpaklrsdfnaravmdrmgtaeeiaeamlflasdrsrfatgsiltv
dggssignhl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4dqxC (C:)
mhhhhhhssgvdlgtenlyfqsmdlnqrvcivtgggsgigrataelfakngayvvvadvn
edaavrvaneigskafgvrvdvssakdaesmvekttakwgrvdvlvnnagfgttgnvvti
peetwdrimsvnvkgiflcskyvipvmrrngggsiinttsytatsaiadrtayvaskgai
ssltramamdhakegirvnavapgtidspyftkifaeakdpaklrsdfnaravmdrmgta
eeiaeamlflasdrsrfatgsiltvdggssignhlvk

    Sequence, based on observed residues (ATOM records): (download) 
    >4dqxC (C:)
qsmdlnqrvcivtgggsgigrataelfakngayvvvadvnedaavrvaneigskafgvrv
dvssakdaesmvekttakwgrvdvlvnnagfgttgnvvtipeetwdrimsvnvkgiflcs
kyvipvmrrngggsiinttsytatsaiadrtayvaskgaissltramamdhakegirvna
vapgtidspyftkifpaklrsdfnaravmdrmgtaeeiaeamlflasdrsrfatgsiltv
dggssignhlv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4dqxD (D:)
mhhhhhhssgvdlgtenlyfqsmdlnqrvcivtgggsgigrataelfakngayvvvadvn
edaavrvaneigskafgvrvdvssakdaesmvekttakwgrvdvlvnnagfgttgnvvti
peetwdrimsvnvkgiflcskyvipvmrrngggsiinttsytatsaiadrtayvaskgai
ssltramamdhakegirvnavapgtidspyftkifaeakdpaklrsdfnaravmdrmgta
eeiaeamlflasdrsrfatgsiltvdggssignhlvk

    Sequence, based on observed residues (ATOM records): (download) 
    >4dqxD (D:)
qsmdlnqrvcivtgggsgigrataelfakngayvvvadvnedaavrvaneigskafgvrv
dvssakdaesmvekttakwgrvdvlvnnagfgttgnvvtipeetwdrimsvnvkgiflcs
kyvipvmrrngggsiinttsytatsaiadrtayvaskgaissltramamdhakegirvna
vapgtidspyftkifaeklrsdfnaravmdrmgtaeeiaeamlflasdrsrfatgsiltv
dggssignhl