PDB entry 4dld
View 4dld on RCSB PDB site
Description: Crystal structure of the GluK1 ligand-binding domain (S1S2) in complex with the antagonist (S)-2-amino-3-(2-(2-carboxyethyl)-5-chloro-4-nitrophenyl)propionic acid at 2.0 A resolution
Class: membrane protein
Keywords: ionotropic glutamate receptor, glutamate, membrane, MEMBRANE PROTEIN
Deposited on
2012-02-06, released
2012-10-10
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-08-16, with a file datestamp of
2017-08-11.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Glutamate receptor, ionotropic kainate 1
Species: Rattus norvegicus [TaxId:10116]
Gene: Grik1
Database cross-references and differences (RAF-indexed):
- Uniprot P22756 (Start-115)
- see remark 999 (33)
- linker (116-117)
- Uniprot P22756 (118-256)
Domains in SCOPe 2.08: d4dlda_ - Chain 'B':
Compound: Glutamate receptor, ionotropic kainate 1
Species: Rattus norvegicus [TaxId:10116]
Gene: Grik1
Database cross-references and differences (RAF-indexed):
- Uniprot P22756 (Start-115)
- see remark 999 (33)
- linker (116-117)
- Uniprot P22756 (118-256)
Domains in SCOPe 2.08: d4dldb_ - Heterogens: TZG, CL, SO4, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4dldA (A:)
ganrtlivttileepyvmyrksdkplygndrfegycldllkelsnilgflydvklvpdgk
ygaqndkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpi
dsaddlakqtkieygavrdgstmtffkkskistyekmwafmssrqqsalvknsdegiqrv
lttdyallmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqee
gklhmmkekwwrgngcp
Sequence, based on observed residues (ATOM records): (download)
>4dldA (A:)
nrtlivttileepyvmyrksdkplygndrfegycldllkelsnilgflydvklvpdgkyg
aqndkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpids
addlakqtkieygavrdgstmtffkkskistyekmwafmssrqqsalvknsdegiqrvlt
tdyallmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqeegk
lhmmkekwwrgngcp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4dldB (B:)
ganrtlivttileepyvmyrksdkplygndrfegycldllkelsnilgflydvklvpdgk
ygaqndkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpi
dsaddlakqtkieygavrdgstmtffkkskistyekmwafmssrqqsalvknsdegiqrv
lttdyallmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqee
gklhmmkekwwrgngcp
Sequence, based on observed residues (ATOM records): (download)
>4dldB (B:)
rtlivttileepyvmyrksdkplygndrfegycldllkelsnilgflydvklvpdgkyga
qndkgewngmvkelidhradlavapltityvrekvidfskpfmtlgisilyrkgtpidsa
ddlakqtkieygavrdgstmtffkkskistyekmwafmssrqqsalvknsdegiqrvltt
dyallmestsieyvtqrncnltqigglidskgygvgtpigspyrdkitiailqlqeegkl
hmmkekwwrgngcp