PDB entry 4dhl

View 4dhl on RCSB PDB site
Description: Crystal structure of red kidney bean purple acid phosphatase in complex with Maybridge fragment MO07123
Class: hydrolase
Keywords: Catalytic C domain, N terminal domain, Phosphatase, Acid Phosphatase, Phosphoric Monoester Hydrolases, Hydrolase, MO07123, Maybridge, Fragment, lysosome
Deposited on 2012-01-29, released 2012-12-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: purple acid phosphatase
    Species: Phaseolus vulgaris [TaxId:3885]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4dhla1, d4dhla2
  • Chain 'B':
    Compound: purple acid phosphatase
    Species: Phaseolus vulgaris [TaxId:3885]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4dhlb1, d4dhlb2
  • Chain 'C':
    Compound: purple acid phosphatase
    Species: Phaseolus vulgaris [TaxId:3885]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4dhlc1, d4dhlc2
  • Chain 'D':
    Compound: purple acid phosphatase
    Species: Phaseolus vulgaris [TaxId:3885]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4dhld1, d4dhld2
  • Heterogens: ZN, FE, 0K7, GOL, SO4, EDO, NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4dhlA (A:)
knrdmpldsdvfrvppgynapqqvhitqgdlvgramiiswvtmdepgssavrywsekngr
kriakgkmstyrffnyssgfihhttirklkyntkyyyevglrnttrrfsfitppqtgldv
pytfgligdlgqsfdsnttlshyelspkkgqtvlfvgdlsyadrypnhdnvrwdtwgrft
ersvayqpwiwtagnheiefapeinetepfkpfsyryhvpyeasqstspfwysikrasah
iivlssysaygrgtpqytwlkkelrkvkrsetpwlivlmhsplynsynhhfmegeamrtk
feawfvkykvdvvfaghvhayerservsniaykitnglctpvkdqsapvyitigdagnyg
vidsnmiqpqpeysafreasfghgmfdiknrthahfswnrnqdgvaveadsvwffnrhwy
pvddst

    Sequence, based on observed residues (ATOM records): (download) 
    >4dhlA (A:)
nrdmpldsdvfrvppgynapqqvhitqgdlvgramiiswvtmdepgssavrywsekngrk
riakgkmstyrffnyssgfihhttirklkyntkyyyevglrnttrrfsfitppqtgldvp
ytfgligdlgqsfdsnttlshyelspkkgqtvlfvgdlsyadrypnhdnvrwdtwgrfte
rsvayqpwiwtagnheiefapeinetepfkpfsyryhvpyeasqstspfwysikrasahi
ivlssysaygrgtpqytwlkkelrkvkrsetpwlivlmhsplynsynhhfmegeamrtkf
eawfvkykvdvvfaghvhayerservsniaykitnglctpvkdqsapvyitigdagnygv
idsnmiqpqpeysafreasfghgmfdiknrthahfswnrnqdgvaveadsvwffnrhwyp
vdds

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4dhlB (B:)
knrdmpldsdvfrvppgynapqqvhitqgdlvgramiiswvtmdepgssavrywsekngr
kriakgkmstyrffnyssgfihhttirklkyntkyyyevglrnttrrfsfitppqtgldv
pytfgligdlgqsfdsnttlshyelspkkgqtvlfvgdlsyadrypnhdnvrwdtwgrft
ersvayqpwiwtagnheiefapeinetepfkpfsyryhvpyeasqstspfwysikrasah
iivlssysaygrgtpqytwlkkelrkvkrsetpwlivlmhsplynsynhhfmegeamrtk
feawfvkykvdvvfaghvhayerservsniaykitnglctpvkdqsapvyitigdagnyg
vidsnmiqpqpeysafreasfghgmfdiknrthahfswnrnqdgvaveadsvwffnrhwy
pvddst

    Sequence, based on observed residues (ATOM records): (download) 
    >4dhlB (B:)
nrdmpldsdvfrvppgynapqqvhitqgdlvgramiiswvtmdepgssavrywsekngrk
riakgkmstyrffnyssgfihhttirklkyntkyyyevglrnttrrfsfitppqtgldvp
ytfgligdlgqsfdsnttlshyelspkkgqtvlfvgdlsyadrypnhdnvrwdtwgrfte
rsvayqpwiwtagnheiefapeinetepfkpfsyryhvpyeasqstspfwysikrasahi
ivlssysaygrgtpqytwlkkelrkvkrsetpwlivlmhsplynsynhhfmegeamrtkf
eawfvkykvdvvfaghvhayerservsniaykitnglctpvkdqsapvyitigdagnygv
idsnmiqpqpeysafreasfghgmfdiknrthahfswnrnqdgvaveadsvwffnrhwyp
vddst

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4dhlC (C:)
knrdmpldsdvfrvppgynapqqvhitqgdlvgramiiswvtmdepgssavrywsekngr
kriakgkmstyrffnyssgfihhttirklkyntkyyyevglrnttrrfsfitppqtgldv
pytfgligdlgqsfdsnttlshyelspkkgqtvlfvgdlsyadrypnhdnvrwdtwgrft
ersvayqpwiwtagnheiefapeinetepfkpfsyryhvpyeasqstspfwysikrasah
iivlssysaygrgtpqytwlkkelrkvkrsetpwlivlmhsplynsynhhfmegeamrtk
feawfvkykvdvvfaghvhayerservsniaykitnglctpvkdqsapvyitigdagnyg
vidsnmiqpqpeysafreasfghgmfdiknrthahfswnrnqdgvaveadsvwffnrhwy
pvddst

    Sequence, based on observed residues (ATOM records): (download) 
    >4dhlC (C:)
knrdmpldsdvfrvppgynapqqvhitqgdlvgramiiswvtmdepgssavrywsekngr
kriakgkmstyrffnyssgfihhttirklkyntkyyyevglrnttrrfsfitppqtgldv
pytfgligdlgqsfdsnttlshyelspkkgqtvlfvgdlsyadrypnhdnvrwdtwgrft
ersvayqpwiwtagnheiefapeinetepfkpfsyryhvpyeasqstspfwysikrasah
iivlssysaygrgtpqytwlkkelrkvkrsetpwlivlmhsplynsynhhfmegeamrtk
feawfvkykvdvvfaghvhayerservsniaykitnglctpvkdqsapvyitigdagnyg
vidsnmiqpqpeysafreasfghgmfdiknrthahfswnrnqdgvaveadsvwffnrhwy
pvdd

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4dhlD (D:)
knrdmpldsdvfrvppgynapqqvhitqgdlvgramiiswvtmdepgssavrywsekngr
kriakgkmstyrffnyssgfihhttirklkyntkyyyevglrnttrrfsfitppqtgldv
pytfgligdlgqsfdsnttlshyelspkkgqtvlfvgdlsyadrypnhdnvrwdtwgrft
ersvayqpwiwtagnheiefapeinetepfkpfsyryhvpyeasqstspfwysikrasah
iivlssysaygrgtpqytwlkkelrkvkrsetpwlivlmhsplynsynhhfmegeamrtk
feawfvkykvdvvfaghvhayerservsniaykitnglctpvkdqsapvyitigdagnyg
vidsnmiqpqpeysafreasfghgmfdiknrthahfswnrnqdgvaveadsvwffnrhwy
pvddst

    Sequence, based on observed residues (ATOM records): (download) 
    >4dhlD (D:)
nrdmpldsdvfrvppgynapqqvhitqgdlvgramiiswvtmdepgssavrywsekngrk
riakgkmstyrffnyssgfihhttirklkyntkyyyevglrnttrrfsfitppqtgldvp
ytfgligdlgqsfdsnttlshyelspkkgqtvlfvgdlsyadrypnhdnvrwdtwgrfte
rsvayqpwiwtagnheiefapeinetepfkpfsyryhvpyeasqstspfwysikrasahi
ivlssysaygrgtpqytwlkkelrkvkrsetpwlivlmhsplynsynhhfmegeamrtkf
eawfvkykvdvvfaghvhayerservsniaykitnglctpvkdqsapvyitigdagnygv
idsnmiqpqpeysafreasfghgmfdiknrthahfswnrnqdgvaveadsvwffnrhwyp
vdd