PDB entry 4d8g

View 4d8g on RCSB PDB site
Description: Chlamydia trachomatis NrdB with a Mn/Fe cofactor (procedure 2 - low Mn)
Class: oxidoreductase
Keywords: iron, manganese, ribonucleotide reductase, metalloenzyme, OXIDOREDUCTASE
Deposited on 2012-01-10, released 2012-02-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-01-24, with a file datestamp of 2018-01-19.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ribonucleoside-diphosphate reductase subunit beta
    Species: Chlamydia trachomatis [TaxId:813]
    Gene: CT_828, nrdB
    Database cross-references and differences (RAF-indexed):
    • Uniprot O84835 (20-End)
      • expression tag (12-19)
    Domains in SCOPe 2.08: d4d8ga1, d4d8ga2
  • Chain 'B':
    Compound: Ribonucleoside-diphosphate reductase subunit beta
    Species: Chlamydia trachomatis [TaxId:813]
    Gene: CT_828, nrdB
    Database cross-references and differences (RAF-indexed):
    • Uniprot O84835 (20-End)
      • expression tag (10-19)
    Domains in SCOPe 2.08: d4d8gb1, d4d8gb2
  • Chain 'C':
    Compound: Ribonucleoside-diphosphate reductase subunit beta
    Species: Chlamydia trachomatis [TaxId:813]
    Gene: CT_828, nrdB
    Database cross-references and differences (RAF-indexed):
    • Uniprot O84835 (20-End)
      • expression tag (14-19)
    Domains in SCOPe 2.08: d4d8gc1, d4d8gc2
  • Chain 'D':
    Compound: Ribonucleoside-diphosphate reductase subunit beta
    Species: Chlamydia trachomatis [TaxId:813]
    Gene: CT_828, nrdB
    Database cross-references and differences (RAF-indexed):
    • Uniprot O84835 (20-End)
      • expression tag (18-19)
    Domains in SCOPe 2.08: d4d8gd1, d4d8gd2
  • Heterogens: MN, FE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4d8gA (A:)
mgsshhhhhhssglvprgshmqadildgkqkrvnlnskrlvncnqvdvnqlvpikykwaw
ehylngcannwlpteipmgkdielwksdrlsederrvillnlgffstaeslvgnnivlai
fkhvtnpearqyllrqafeeavhthtflyiceslgldekeifnayneraaikakddfqme
itgkvldpnfrtdsveglqefvknlvgyyiimegiffysgfvmilsfhrqnkmigigeqy
qyilrdetihlnfgidlingikeenpeiwtpelqqeivelikravdleieyaqdclprgi
lglrasmfidyvqhiadrrleriglkpiyhtknpfpwmsetidlnkeknffetrvieyqh
aasltw

    Sequence, based on observed residues (ATOM records): (download) 
    >4d8gA (A:)
glvprgshmqadildgkqkrvnlnskrlvncnqvdvnqlvpikykwawehylngcannwl
pteipmgkdielwksdrlsederrvillnlgffstaeslvgnnivlaifkhvtnpearqy
llrqafeeavhthtflyiceslgldekeifnayneraaikakddfqmeitgkvldpnfrt
dsveglqefvknlvgyyiimegiffysgfvmilsfhrqnkmigigeqyqyilrdetihln
fgidlingikeenpeiwtpelqqeivelikravdleieyaqdclprgilglrasmfidyv
qhiadrrleriglkpiyhtknpfpwm

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4d8gB (B:)
mgsshhhhhhssglvprgshmqadildgkqkrvnlnskrlvncnqvdvnqlvpikykwaw
ehylngcannwlpteipmgkdielwksdrlsederrvillnlgffstaeslvgnnivlai
fkhvtnpearqyllrqafeeavhthtflyiceslgldekeifnayneraaikakddfqme
itgkvldpnfrtdsveglqefvknlvgyyiimegiffysgfvmilsfhrqnkmigigeqy
qyilrdetihlnfgidlingikeenpeiwtpelqqeivelikravdleieyaqdclprgi
lglrasmfidyvqhiadrrleriglkpiyhtknpfpwmsetidlnkeknffetrvieyqh
aasltw

    Sequence, based on observed residues (ATOM records): (download) 
    >4d8gB (B:)
ssglvprgshmqadildgkqkrvnlnskrlvncnqvdvnqlvpikykwawehylngcann
wlpteipmgkdielwksdrlsederrvillnlgffstaeslvgnnivlaifkhvtnpear
qyllrqafeeavhthtflyiceslgldekeifnayneraaikakddfqmeitgkvldpnf
rtdsveglqefvknlvgyyiimegiffysgfvmilsfhrqnkmigigeqyqyilrdetih
lnfgidlingikeenpeiwtpelqqeivelikravdleieyaqdclprgilglrasmfid
yvqhiadrrleriglkpiyhtknpfpwmsetidl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4d8gC (C:)
mgsshhhhhhssglvprgshmqadildgkqkrvnlnskrlvncnqvdvnqlvpikykwaw
ehylngcannwlpteipmgkdielwksdrlsederrvillnlgffstaeslvgnnivlai
fkhvtnpearqyllrqafeeavhthtflyiceslgldekeifnayneraaikakddfqme
itgkvldpnfrtdsveglqefvknlvgyyiimegiffysgfvmilsfhrqnkmigigeqy
qyilrdetihlnfgidlingikeenpeiwtpelqqeivelikravdleieyaqdclprgi
lglrasmfidyvqhiadrrleriglkpiyhtknpfpwmsetidlnkeknffetrvieyqh
aasltw

    Sequence, based on observed residues (ATOM records): (download) 
    >4d8gC (C:)
vprgshmqadildgkqkrvnlnskrlvncnqvdvnqlvpikykwawehylngcannwlpt
eipmgkdielwksdrlsederrvillnlgffstaeslvgnnivlaifkhvtnpearqyll
rqafeeavhthtflyiceslgldekeifnayneraaikakddfqmeitgkvldpnfrtds
veglqefvknlvgyyiimegiffysgfvmilsfhrqnkmigigeqyqyilrdetihlnfg
idlingikeenpeiwtpelqqeivelikravdleieyaqdclprgilglrasmfidyvqh
iadrrleriglkpiyhtknpfpwm

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4d8gD (D:)
mgsshhhhhhssglvprgshmqadildgkqkrvnlnskrlvncnqvdvnqlvpikykwaw
ehylngcannwlpteipmgkdielwksdrlsederrvillnlgffstaeslvgnnivlai
fkhvtnpearqyllrqafeeavhthtflyiceslgldekeifnayneraaikakddfqme
itgkvldpnfrtdsveglqefvknlvgyyiimegiffysgfvmilsfhrqnkmigigeqy
qyilrdetihlnfgidlingikeenpeiwtpelqqeivelikravdleieyaqdclprgi
lglrasmfidyvqhiadrrleriglkpiyhtknpfpwmsetidlnkeknffetrvieyqh
aasltw

    Sequence, based on observed residues (ATOM records): (download) 
    >4d8gD (D:)
shmqadildgkqkrvnlnskrlvncnqvdvnqlvpikykwawehylngcannwlpteipm
gkdielwksdrlsederrvillnlgffstaeslvgnnivlaifkhvtnpearqyllrqaf
eeavhthtflyiceslgldekeifnayneraaikakddfqmeitgkvldpnfrtdsvegl
qefvknlvgyyiimegiffysgfvmilsfhrqnkmigigeqyqyilrdetihlnfgidli
ngikeenpeiwtpelqqeivelikravdleieyaqdclprgilglrasmfidyvqhiadr
rleriglkpiyhtknpfpwmsetidlnkekn