PDB entry 4d1l
View 4d1l on RCSB PDB site
Description: Tetramerization domain of zebrafish p53 (crystal form I)
Class: transcription
Keywords: transcription, p53 family, tumor suppressor, transcription factor, tetramer, protein evolution
Deposited on
2014-05-02, released
2014-08-27
The last revision prior to the SCOPe 2.05 freeze date was dated
2014-09-17, with a file datestamp of
2014-09-12.
Experiment type: XRAY
Resolution: 1.97 Å
R-factor: 0.21876
AEROSPACI score: 0.36
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Cellular tumor antigen p53
Species: Danio rerio [TaxId:7955]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4d1la_ - Chain 'B':
Compound: Cellular tumor antigen p53
Species: Danio rerio [TaxId:7955]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4d1lb_ - Chain 'C':
Compound: Cellular tumor antigen p53
Species: Danio rerio [TaxId:7955]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4d1lc_ - Chain 'D':
Compound: Cellular tumor antigen p53
Species: Danio rerio [TaxId:7955]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4d1ld_ - Chain 'E':
Compound: Cellular tumor antigen p53
Species: Danio rerio [TaxId:7955]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4d1le_ - Chain 'F':
Compound: Cellular tumor antigen p53
Species: Danio rerio [TaxId:7955]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4d1lf_ - Heterogens: ZN, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4d1lA (A:)
ggseeiftlqvrgreryeilkklndslelsdvvpasdaekyrqkfmtk
Sequence, based on observed residues (ATOM records): (download)
>4d1lA (A:)
eiftlqvrgreryeilkklndslelsdvvpasdaekyrq
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4d1lB (B:)
ggseeiftlqvrgreryeilkklndslelsdvvpasdaekyrqkfmtk
Sequence, based on observed residues (ATOM records): (download)
>4d1lB (B:)
eiftlqvrgreryeilkklndslelsdvvpasdaeky
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4d1lC (C:)
ggseeiftlqvrgreryeilkklndslelsdvvpasdaekyrqkfmtk
Sequence, based on observed residues (ATOM records): (download)
>4d1lC (C:)
eeiftlqvrgreryeilkklndslelsdvvpasdaekyrq
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4d1lD (D:)
ggseeiftlqvrgreryeilkklndslelsdvvpasdaekyrqkfmtk
Sequence, based on observed residues (ATOM records): (download)
>4d1lD (D:)
eeiftlqvrgreryeilkklndslelsdvvpasdaekyrqk
- Chain 'E':
Sequence, based on SEQRES records: (download)
>4d1lE (E:)
ggseeiftlqvrgreryeilkklndslelsdvvpasdaekyrqkfmtk
Sequence, based on observed residues (ATOM records): (download)
>4d1lE (E:)
eiftlqvrgreryeilkklndslelsdvvpasdaekyrqkf
- Chain 'F':
Sequence, based on SEQRES records: (download)
>4d1lF (F:)
ggseeiftlqvrgreryeilkklndslelsdvvpasdaekyrqkfmtk
Sequence, based on observed residues (ATOM records): (download)
>4d1lF (F:)
eeiftlqvrgreryeilkklndslelsdvvpasdaekyr