PDB entry 4d0c

View 4d0c on RCSB PDB site
Description: complex of a b21 chicken mhc class i molecule and a 10mer chicken peptide
Deposited on 2014-04-25, released 2015-05-06
The last revision was dated 2019-03-27, with a file datestamp of 2019-03-22.
No data on structure quality are available

Chains and heterogens:

  • Chain 'A':
    Compound: MHC class I alpha chain 2
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q95601 (Start-290)
      • expression tag (291-296)
  • Chain 'B':
    Compound: Beta-2-microglobulin
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: 10mer peptide
    Species: GALLUS GALLUS, synthetic [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • PDB 4D0C (0-9)
  • Heterogens: EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.04, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4d0cA (A:)
mgscgalglglllaavcgaaaelhtlryirtamtdpgpglpwfvdvgyvdgelfmhynst
arravprtewiaantdqqywdretqivqgseqinrenldilrrrynqtggshtvqwmsgc
diledgtirgyhqaaydgrdfvafdkgtmtltaavpeavptkrkweeggyaeglkqylee
tcvewlrryveygkaelgrrerpevrvwgkeadgiltlscrahgfyprpivvswlkdgav
rgqdaqsggivpngdgtyhtwvtidaqpgdgdkyqcrvehaslpqpglyswrsggglndi
feaqkiewhensssvdklaaalehhhhhh

    Sequence, based on observed residues (ATOM records):
    >4d0cA (A:)
elhtlryirtamtdpgpglpwfvdvgyvdgelfmhynstarravprtewiaantdqqywd
retqivqgseqinrenldilrrrynqtggshtvqwmsgcdiledgtirgyhqaaydgrdf
vafdkgtmtltaavpeavptkrkweeggyaeglkqyleetcvewlrryveygkaelgrre
rpevrvwgkeadgiltlscrahgfyprpivvswlkdgavrgqdaqsggivpngdgtyhtw
vtidaqpgdgdkyqcrvehaslpqpglyswrsgggl

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4d0cB (B:)
dltpkvqvysrfpasagtknvlncfaagfhppkisitlmkdgvpmegaqysdmsfnddwt
fqrlvhadftpssgstyackvehetlkepqvykwdpef

    Sequence, based on observed residues (ATOM records):
    >4d0cB (B:)
ltpkvqvysrfpasagtknvlncfaagfhppkisitlmkdgvpmegaqysdmsfnddwtf
qrlvhadftpssgstyackvehetlkepqvykwdpef

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >4d0cC (C:)
tagqsnydrl