PDB entry 4cz2
View 4cz2 on RCSB PDB site
Description: Complex of human VARP-ANKRD1 with Rab32-GppCp. Selenomet derivative.
Class: signaling protein
Keywords: signaling protein, varp, rab-effector, rab, endosome, vesicle trafficking, melanosome biogenesis
Deposited on
2014-04-16, released
2014-06-04
The last revision prior to the SCOPe 2.05 freeze date was dated
2014-06-25, with a file datestamp of
2014-06-20.
Experiment type: XRAY
Resolution: 2.97 Å
R-factor: 0.1968
AEROSPACI score: 0.19
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: ras-related protein rab-32
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q13637
- engineered mutation (89)
- engineered mutation (104)
- engineered mutation (157)
- engineered mutation (162)
- engineered mutation (196)
Domains in SCOPe 2.05: d4cz2a_ - Chain 'B':
Compound: ras-related protein rab-32
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q13637
- engineered mutation (89)
- engineered mutation (104)
- engineered mutation (157)
- engineered mutation (162)
- engineered mutation (196)
Domains in SCOPe 2.05: d4cz2b_ - Chain 'C':
Compound: ras-related protein rab-32
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q13637
- engineered mutation (89)
- engineered mutation (104)
- engineered mutation (157)
- engineered mutation (162)
- engineered mutation (196)
Domains in SCOPe 2.05: d4cz2c_ - Chain 'D':
Compound: ankyrin repeat domain-containing protein 27
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'E':
Compound: ankyrin repeat domain-containing protein 27
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'F':
Compound: ankyrin repeat domain-containing protein 27
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Heterogens: GCP, MG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4cz2A (A:)
gplgsmagggagdpglgaaaapapetrehlfkvlvigelgvgktsiikryvhqlfsqhyr
atigvdfalkvlnwdsrtlvrlqlwdiaglerfgnmtrvyykeamgafvvfdisrsstfe
avlkwksdldskvhlpngspipavllankcdqnkdssmspsqmdqfckehgfagwfetsa
kdninieeaarflvekmlvnhqsfpneendvdkikldqetlraenksqcc
Sequence, based on observed residues (ATOM records): (download)
>4cz2A (A:)
rehlfkvlvigelgvgktsiikryvhqlfsqhyratigvdfalkvlnwdsrtlvrlqlwd
iaglerfgnmtrvyykeamgafvvfdisrsstfeavlkwksdldskvhlpngspipavll
ankcdqnmspsqmdqfckehgfagwfetsakdninieeaarflvekmlvnhq
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4cz2B (B:)
gplgsmagggagdpglgaaaapapetrehlfkvlvigelgvgktsiikryvhqlfsqhyr
atigvdfalkvlnwdsrtlvrlqlwdiaglerfgnmtrvyykeamgafvvfdisrsstfe
avlkwksdldskvhlpngspipavllankcdqnkdssmspsqmdqfckehgfagwfetsa
kdninieeaarflvekmlvnhqsfpneendvdkikldqetlraenksqcc
Sequence, based on observed residues (ATOM records): (download)
>4cz2B (B:)
trehlfkvlvigelgvgktsiikryvhqlfsqhyratigvdfalkvlnwdsrtlvrlqlw
diaglerfgnmtrvyykeamgafvvfdisrsstfeavlkwksdldskvhlpngspipavl
lankcdqnkdssmspsqmdqfckehgfagwfetsakdninieeaarflvekmlvnhqsf
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4cz2C (C:)
gplgsmagggagdpglgaaaapapetrehlfkvlvigelgvgktsiikryvhqlfsqhyr
atigvdfalkvlnwdsrtlvrlqlwdiaglerfgnmtrvyykeamgafvvfdisrsstfe
avlkwksdldskvhlpngspipavllankcdqnkdssmspsqmdqfckehgfagwfetsa
kdninieeaarflvekmlvnhqsfpneendvdkikldqetlraenksqcc
Sequence, based on observed residues (ATOM records): (download)
>4cz2C (C:)
rehlfkvlvigelgvgktsiikryvhqlfsqhyratigvdfalkvlnwdsrtlvrlqlwd
iaglerfgnmtrvyykeamgafvvfdisrsstfeavlkwksdldskvhlpngspipavll
ankcdqnmspsqmdqfckehgfagwfetsakdninieeaarflvekmlvnhqs
- Chain 'D':
No sequence available.
- Chain 'E':
No sequence available.
- Chain 'F':
No sequence available.