PDB entry 4cyv

View 4cyv on RCSB PDB site
Description: Structure of the A_mallard_Sweden_51_2002 H10 Avian Haemmaglutinin
Class: viral protein
Keywords: viral protein
Deposited on 2014-04-15, released 2014-06-11
The last revision prior to the SCOPe 2.05 freeze date was dated 2014-07-30, with a file datestamp of 2014-07-25.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.21575
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin
    Species: INFLUENZA A VIRUS (A/MALLARD/SWEDEN/51/2002 (H10N2)) [TaxId:757360]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4cyva_
  • Chain 'B':
    Compound: Hemagglutinin
    Species: INFLUENZA A VIRUS (A/MALLARD/SWEDEN/51/2002 (H10N2)) [TaxId:757360]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4cyvb_
  • Chain 'C':
    Compound: Hemagglutinin
    Species: INFLUENZA A VIRUS (A/MALLARD/SWEDEN/51/2002 (H10N2)) [TaxId:757360]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4cyvc_
  • Chain 'D':
    Compound: Hemagglutinin
    Species: INFLUENZA A VIRUS (A/MALLARD/SWEDEN/51/2002 (H10N2)) [TaxId:757360]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4cyvd_
  • Chain 'E':
    Compound: Hemagglutinin
    Species: INFLUENZA A VIRUS (A/MALLARD/SWEDEN/51/2002 (H10N2)) [TaxId:757360]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4cyve_
  • Chain 'F':
    Compound: Hemagglutinin
    Species: INFLUENZA A VIRUS (A/MALLARD/SWEDEN/51/2002 (H10N2)) [TaxId:757360]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4cyvf_
  • Heterogens: NAG, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4cyvA (A:)
ldkiclghhavangtivktltneqeevtnatetvestsldrlcmkgrshkdlgnchpigm
ligtpacdlhltgtwdtlierenaiaycypgatvneealrqkimesggiskistgftygs
sinsagttkacmrnggnsfyaelkwlvskskgqnfpqttntyrntdtaehlimwgihhps
stqekndlygtqslsisvgsstyqsnfvpvvgarpqvngqsgridfhwtlvqpgdnitfs
hnggliapsrvskligrglgiqsdapidnnceskcfwrggsintrlpfqnlsprtvgqcp
kyvnkkslmlatgmrnvpeivqgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4cyvA (A:)
dkiclghhavangtivktltneqeevtnatetvestsldrlcmkgrshkdlgnchpigml
igtpacdlhltgtwdtlierenaiaycypgatvneealrqkimesggiskistgftygss
insagttkacmrnggnsfyaelkwlvskskgqnfpqttntyrntdtaehlimwgihhpss
tqekndlygtqslsisvgsstyqsnfvpvvgarpqvngqsgridfhwtlvqpgdnitfsh
nggliapsrvskligrglgiqsdapidnnceskcfwrggsintrlpfqnlsprtvgqcpk
yvnkkslmlatgmrnvpe

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4cyvB (B:)
glfgaiagfiengwegmvdgwygfrhqnaqgtgqaadykstqaaidqitgklnrliektn
tefesiesefseiehqignvinwtkdsitdiwtyqaellvamenqhtidmadsemlnlye
rvrkqlrqnaeedgkgcfeiyhacddscmesirnntydhsqyreeallnrln

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4cyvC (C:)
ldkiclghhavangtivktltneqeevtnatetvestsldrlcmkgrshkdlgnchpigm
ligtpacdlhltgtwdtlierenaiaycypgatvneealrqkimesggiskistgftygs
sinsagttkacmrnggnsfyaelkwlvskskgqnfpqttntyrntdtaehlimwgihhps
stqekndlygtqslsisvgsstyqsnfvpvvgarpqvngqsgridfhwtlvqpgdnitfs
hnggliapsrvskligrglgiqsdapidnnceskcfwrggsintrlpfqnlsprtvgqcp
kyvnkkslmlatgmrnvpeivqgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4cyvC (C:)
ldkiclghhavangtivktltneqeevtnatetvestsldrlcmkgrshkdlgnchpigm
ligtpacdlhltgtwdtlierenaiaycypgatvneealrqkimesggiskistgftygs
sinsagttkacmrnggnsfyaelkwlvskskgqnfpqttntyrntdtaehlimwgihhps
stqekndlygtqslsisvgsstyqsnfvpvvgarpqvngqsgridfhwtlvqpgdnitfs
hnggliapsrvskligrglgiqsdapidnnceskcfwrggsintrlpfqnlsprtvgqcp
kyvnkkslmlatgmrnvpe

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4cyvD (D:)
glfgaiagfiengwegmvdgwygfrhqnaqgtgqaadykstqaaidqitgklnrliektn
tefesiesefseiehqignvinwtkdsitdiwtyqaellvamenqhtidmadsemlnlye
rvrkqlrqnaeedgkgcfeiyhacddscmesirnntydhsqyreeallnrln

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4cyvE (E:)
ldkiclghhavangtivktltneqeevtnatetvestsldrlcmkgrshkdlgnchpigm
ligtpacdlhltgtwdtlierenaiaycypgatvneealrqkimesggiskistgftygs
sinsagttkacmrnggnsfyaelkwlvskskgqnfpqttntyrntdtaehlimwgihhps
stqekndlygtqslsisvgsstyqsnfvpvvgarpqvngqsgridfhwtlvqpgdnitfs
hnggliapsrvskligrglgiqsdapidnnceskcfwrggsintrlpfqnlsprtvgqcp
kyvnkkslmlatgmrnvpeivqgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4cyvE (E:)
ldkiclghhavangtivktltneqeevtnatetvestsldrlcmkgrshkdlgnchpigm
ligtpacdlhltgtwdtlierenaiaycypgatvneealrqkimesggiskistgftygs
sinsagttkacmrnggnsfyaelkwlvskskgqnfpqttntyrntdtaehlimwgihhps
stqekndlygtqslsisvgsstyqsnfvpvvgarpqvngqsgridfhwtlvqpgdnitfs
hnggliapsrvskligrglgiqsdapidnnceskcfwrggsintrlpfqnlsprtvgqcp
kyvnkkslmlatgmrnvpe

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4cyvF (F:)
glfgaiagfiengwegmvdgwygfrhqnaqgtgqaadykstqaaidqitgklnrliektn
tefesiesefseiehqignvinwtkdsitdiwtyqaellvamenqhtidmadsemlnlye
rvrkqlrqnaeedgkgcfeiyhacddscmesirnntydhsqyreeallnrln