PDB entry 4cvm

View 4cvm on RCSB PDB site
Description: PaMurF in complex with AMP-PNP and UDP-MurNAc-tripeptide (mDAP)
Class: ligase
Keywords: ligase, murf, tripeptide,
Deposited on 2014-03-28, released 2015-04-22
The last revision prior to the SCOPe 2.05 freeze date was dated 2015-04-22, with a file datestamp of 2015-04-17.
Experiment type: XRAY
Resolution: 2.06 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase
    Species: Pseudomonas aeruginosa PAO1 [TaxId:208964]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9HVZ7 (0-End)
      • conflict (38)
      • conflict (427)
    Domains in SCOPe 2.05: d4cvma1, d4cvma2, d4cvma3
  • Heterogens: ALA, UDP, MUB, FGA, ANP, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4cvmA (A:)
    mleplrlsqltvaldarligedavfsavstdsraigpgelfialsgprfdghdylaevaa
    kgavaalverevadaplpqllvrdtraalgrlgalnrrkftgplaamtgssgkttvkeml
    asilrtqagdaesvlatrgnlnndlgvpltllqlapqhrsavielgasrigeiaytvelt
    rphvaiitnagtahvgefggpekiveakgeileglaadgtavlnlddkafdtwkarasgr
    plltfsldrpqadfraadlqrdargcmgfrlqgvageaqvqlnllgrhnvanalaaaaaa
    halgvpldgivaglqalqpvkgravaqltasglrviddsynanpasmlaaidilsgfsgr
    tvlvlgdmgelgswaeqahrevgayaagkvsalyavgplmahavqafgatgrhfadqasl
    igalatedptttilikgsrsaamdkvvaalcgsseeshssvdklaaalehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >4cvmA (A:)
    mleplrlsqltvaldarligedavfsavstdsraigpgelfialsgprfdghdylaevaa
    kgavaalverevadaplpqllvrdtraalgrlgalnrrkftgplaamtgssgkttvkeml
    asilrtqagdaesvlatrgnlnndlgvpltllqlapqhrsavielgasrigeiaytvelt
    rphvaiitnagtahvggpekiveakgeileglaadgtavlnlddkafdtwkarasgrpll
    tfsldrpqadfraadlqrdargcmgfrlqgvageaqvqlnllgrhnvanalaaaaaahal
    gvpldgivaglqalqpvkgravaqltasglrviddsynanpasmlaaidilsgfsgrtvl
    vlgdmgaeqahrevgayaagkvsalyavgplmahavqafgatgrhfadqasligalated
    ptttilikgsrsaamdkvvaalc