PDB entry 4c1u

View 4c1u on RCSB PDB site
Description: Structure of the xylo-oligosaccharide specific solute binding protein from Bifidobacterium animalis subsp. lactis Bl-04 in complex with arabinoxylobiose
Class: transport protein
Keywords: transport protein, solute binding protein, probiotic, prebiotic, arabinoxylobiose, abc transport
Deposited on 2013-08-13, released 2013-10-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: sugar transporter solute-binding protein
    Species: BIFIDOBACTERIUM ANIMALIS SUBSP. LACTIS BL-04 [TaxId:580050]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4c1ua_
  • Heterogens: 1PE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4c1uA (A:)
    gshmasmsacggsesssddktitfwhnasagegrqywenlaksfeeanpgtkveiqaiqn
    edfagklqtamqdpasgpdvfmslggaktkemidagqvmdltdkisdtvktdmkttlsaa
    tfdgkvygvpvsvepggmwyskdlfkkagvsdvpatyeelladakklkdsgtdaialgak
    dawpaahwyywlvlrecspevydksvqdhdfsnacwvnagkklqelkdlkvfndgflttt
    aqqganssagllanhkaamelmgawepgvlkdltpdqkpmadlgffafpevaggegepga
    lmggvtyfcvnpkasqtsidfvnymgekknqedyakafstipaseparavvtdeslkqvi
    eyldkapsmqlwmdtalgtnignalnaavvnmlsgqgspedivkamqdaaqkg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4c1uA (A:)
    ddktitfwhnasagegrqywenlaksfeeanpgtkveiqaiqnedfagklqtamqdpasg
    pdvfmslggaktkemidagqvmdltdkisdtvktdmkttlsaatfdgkvygvpvsvepgg
    mwyskdlfkkagvsdvpatyeelladakklkdsgtdaialgakdawpaahwyywlvlrec
    spevydksvqdhdfsnacwvnagkklqelkdlkvfndgfltttaqqganssagllanhka
    amelmgawepgvlkdltpdqkpmadlgffafpevaggegepgalmggvtyfcvnpkasqt
    sidfvnymgekknqedyakafstipaseparavvtdeslkqvieyldkapsmqlwmdtal
    gtnignalnaavvnmlsgqgspedivkamqdaaqkg