PDB entry 4c1u
View 4c1u on RCSB PDB site
Description: Structure of the xylo-oligosaccharide specific solute binding protein from Bifidobacterium animalis subsp. lactis Bl-04 in complex with arabinoxylobiose
Class: transport protein
Keywords: transport protein, solute binding protein, probiotic, prebiotic, arabinoxylobiose, abc transport
Deposited on
2013-08-13, released
2013-10-30
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-06-29.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.4
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: sugar transporter solute-binding protein
Species: BIFIDOBACTERIUM ANIMALIS SUBSP. LACTIS BL-04 [TaxId:580050]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4c1ua_ - Heterogens: 1PE, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4c1uA (A:)
gshmasmsacggsesssddktitfwhnasagegrqywenlaksfeeanpgtkveiqaiqn
edfagklqtamqdpasgpdvfmslggaktkemidagqvmdltdkisdtvktdmkttlsaa
tfdgkvygvpvsvepggmwyskdlfkkagvsdvpatyeelladakklkdsgtdaialgak
dawpaahwyywlvlrecspevydksvqdhdfsnacwvnagkklqelkdlkvfndgflttt
aqqganssagllanhkaamelmgawepgvlkdltpdqkpmadlgffafpevaggegepga
lmggvtyfcvnpkasqtsidfvnymgekknqedyakafstipaseparavvtdeslkqvi
eyldkapsmqlwmdtalgtnignalnaavvnmlsgqgspedivkamqdaaqkg
Sequence, based on observed residues (ATOM records): (download)
>4c1uA (A:)
ddktitfwhnasagegrqywenlaksfeeanpgtkveiqaiqnedfagklqtamqdpasg
pdvfmslggaktkemidagqvmdltdkisdtvktdmkttlsaatfdgkvygvpvsvepgg
mwyskdlfkkagvsdvpatyeelladakklkdsgtdaialgakdawpaahwyywlvlrec
spevydksvqdhdfsnacwvnagkklqelkdlkvfndgfltttaqqganssagllanhka
amelmgawepgvlkdltpdqkpmadlgffafpevaggegepgalmggvtyfcvnpkasqt
sidfvnymgekknqedyakafstipaseparavvtdeslkqvieyldkapsmqlwmdtal
gtnignalnaavvnmlsgqgspedivkamqdaaqkg