PDB entry 4bof

View 4bof on RCSB PDB site
Description: Crystal structure of arginine deiminase from group A streptococcus
Class: hydrolase
Keywords: hydrolase, vaccine
Deposited on 2013-05-20, released 2013-08-21
The last revision prior to the SCOPe 2.04 freeze date was dated 2013-08-28, with a file datestamp of 2013-08-23.
Experiment type: XRAY
Resolution: 2.48 Å
R-factor: 0.2128
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Arginine deiminase
    Species: STREPTOCOCCUS PYOGENES [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4bofa_
  • Chain 'B':
    Compound: Arginine deiminase
    Species: STREPTOCOCCUS PYOGENES [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4bofb_
  • Chain 'C':
    Compound: Arginine deiminase
    Species: STREPTOCOCCUS PYOGENES [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4bofc_
  • Chain 'D':
    Compound: Arginine deiminase
    Species: STREPTOCOCCUS PYOGENES [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4bofd_
  • Chain 'E':
    Compound: Arginine deiminase
    Species: STREPTOCOCCUS PYOGENES [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4bofe_
  • Chain 'F':
    Compound: Arginine deiminase
    Species: STREPTOCOCCUS PYOGENES [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4boff_
  • Chain 'G':
    Compound: Arginine deiminase
    Species: STREPTOCOCCUS PYOGENES [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4bofg_
  • Chain 'H':
    Compound: Arginine deiminase
    Species: STREPTOCOCCUS PYOGENES [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4bofh_
  • Heterogens: SO4, PGE, PG4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4bofA (A:)
mtaqtpihvyseigklkkvllhrpgkeienlmpdylerllfddipfledaqkehdafaqa
lrdegievlyletlaaeslvtpeireafideylseanirgratkkairellmaiednqel
iektmagvqkselpeipasekgltdlvesnypfaidpmpnlyftrdpfatigtgvslnhm
fsetrnretlygkyifthhpiygggkvpmvydrnettrieggdelvlskdvlavgisqrt
daasiekllvnifkqnlgfkkvlafefannrkfmhldtvftmvdydkftihpeiegdlrv
ysvtydneelhiveekgdlaellaanlgvekvdlircggdnlvaagreqwndgsntltia
pgvvvvynrntitnaileskglklikihgselvrgrggprcmsmpferedi

    Sequence, based on observed residues (ATOM records): (download) 
    >4bofA (A:)
qtpihvyseigklkkvllhrpgkeienlmpdylerllfddipfledaqkehdafaqalrd
egievlyletlaaeslvtpeireafideylseanirgratkkairellmaiednqeliek
tmagvqkselpeipasekgltdlvesnypfaidpmpnlyftrdpfatigtgvslnhmfse
trnretlygkyifthhpiygggkvpmvydrnettrieggdelvlskdvlavgisqrtdaa
siekllvnifkqnlgfkkvlafefannrkfmhldtvftmvdydkftihpeiegdlrvysv
tydneelhiveekgdlaellaanlgvekvdlircggdnlvaagreqwndgsntltiapgv
vvvynrntitnaileskglklikihgselvrgrggprcmsmpferedi

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4bofB (B:)
mtaqtpihvyseigklkkvllhrpgkeienlmpdylerllfddipfledaqkehdafaqa
lrdegievlyletlaaeslvtpeireafideylseanirgratkkairellmaiednqel
iektmagvqkselpeipasekgltdlvesnypfaidpmpnlyftrdpfatigtgvslnhm
fsetrnretlygkyifthhpiygggkvpmvydrnettrieggdelvlskdvlavgisqrt
daasiekllvnifkqnlgfkkvlafefannrkfmhldtvftmvdydkftihpeiegdlrv
ysvtydneelhiveekgdlaellaanlgvekvdlircggdnlvaagreqwndgsntltia
pgvvvvynrntitnaileskglklikihgselvrgrggprcmsmpferedi

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4bofC (C:)
mtaqtpihvyseigklkkvllhrpgkeienlmpdylerllfddipfledaqkehdafaqa
lrdegievlyletlaaeslvtpeireafideylseanirgratkkairellmaiednqel
iektmagvqkselpeipasekgltdlvesnypfaidpmpnlyftrdpfatigtgvslnhm
fsetrnretlygkyifthhpiygggkvpmvydrnettrieggdelvlskdvlavgisqrt
daasiekllvnifkqnlgfkkvlafefannrkfmhldtvftmvdydkftihpeiegdlrv
ysvtydneelhiveekgdlaellaanlgvekvdlircggdnlvaagreqwndgsntltia
pgvvvvynrntitnaileskglklikihgselvrgrggprcmsmpferedi

    Sequence, based on observed residues (ATOM records): (download) 
    >4bofC (C:)
aqtpihvyseigklkkvllhrpgkeienlmpdylerllfddipfledaqkehdafaqalr
degievlyletlaaeslvtpeireafideylseanirgratkkairellmaiednqelie
ktmagvqkselpeipasekgltdlvesnypfaidpmpnlyftrdpfatigtgvslnhmfs
etrnretlygkyifthhpiygggkvpmvydrnettrieggdelvlskdvlavgisqrtda
asiekllvnifkqnlgfkkvlafefannrkfmhldtvftmvdydkftihpeiegdlrvys
vtydneelhiveekgdlaellaanlgvekvdlircggdnlvaagreqwndgsntltiapg
vvvvynrntitnaileskglklikihgselvrgrggprcmsmpferedi

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4bofD (D:)
mtaqtpihvyseigklkkvllhrpgkeienlmpdylerllfddipfledaqkehdafaqa
lrdegievlyletlaaeslvtpeireafideylseanirgratkkairellmaiednqel
iektmagvqkselpeipasekgltdlvesnypfaidpmpnlyftrdpfatigtgvslnhm
fsetrnretlygkyifthhpiygggkvpmvydrnettrieggdelvlskdvlavgisqrt
daasiekllvnifkqnlgfkkvlafefannrkfmhldtvftmvdydkftihpeiegdlrv
ysvtydneelhiveekgdlaellaanlgvekvdlircggdnlvaagreqwndgsntltia
pgvvvvynrntitnaileskglklikihgselvrgrggprcmsmpferedi

    Sequence, based on observed residues (ATOM records): (download) 
    >4bofD (D:)
aqtpihvyseigklkkvllhrpgkeienlmpdylerllfddipfledaqkehdafaqalr
degievlyletlaaeslvtpeireafideylseanirgratkkairellmaiednqelie
ktmagvqkselpeipasekgltdlvesnypfaidpmpnlyftrdpfatigtgvslnhmfs
etrnretlygkyifthhpiygggkvpmvydrnettrieggdelvlskdvlavgisqrtda
asiekllvnifkqnlgfkkvlafefannrkfmhldtvftmvdydkftihpeiegdlrvys
vtydneelhiveekgdlaellaanlgvekvdlircggdnlvaagreqwndgsntltiapg
vvvvynrntitnaileskglklikihgselvrgrggprcmsmpferedi

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4bofE (E:)
mtaqtpihvyseigklkkvllhrpgkeienlmpdylerllfddipfledaqkehdafaqa
lrdegievlyletlaaeslvtpeireafideylseanirgratkkairellmaiednqel
iektmagvqkselpeipasekgltdlvesnypfaidpmpnlyftrdpfatigtgvslnhm
fsetrnretlygkyifthhpiygggkvpmvydrnettrieggdelvlskdvlavgisqrt
daasiekllvnifkqnlgfkkvlafefannrkfmhldtvftmvdydkftihpeiegdlrv
ysvtydneelhiveekgdlaellaanlgvekvdlircggdnlvaagreqwndgsntltia
pgvvvvynrntitnaileskglklikihgselvrgrggprcmsmpferedi

    Sequence, based on observed residues (ATOM records): (download) 
    >4bofE (E:)
pihvyseigklkkvllhrpgkeienlmpdylerllfddipfledaqkehdafaqalrdeg
ievlyletlaaeslvtpeireafideylseanirgratkkairellmaiednqeliektm
agvqkselpeipasekgltdlvesnypfaidpmpnlyftrdpfatigtgvslnhmfsetr
nretlygkyifthhpiygggkvpmvydrnettrieggdelvlskdvlavgisqrtdaasi
ekllvnifkqnlgfkkvlafefannrkfmhldtvftmvdydkftihpeiegdlrvysvty
dneelhiveekgdlaellaanlgvekvdlircggdnlvaagreqwndgsntltiapgvvv
vynrntitnaileskglklikihgselvrgrggprcmsmpferedi

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4bofF (F:)
mtaqtpihvyseigklkkvllhrpgkeienlmpdylerllfddipfledaqkehdafaqa
lrdegievlyletlaaeslvtpeireafideylseanirgratkkairellmaiednqel
iektmagvqkselpeipasekgltdlvesnypfaidpmpnlyftrdpfatigtgvslnhm
fsetrnretlygkyifthhpiygggkvpmvydrnettrieggdelvlskdvlavgisqrt
daasiekllvnifkqnlgfkkvlafefannrkfmhldtvftmvdydkftihpeiegdlrv
ysvtydneelhiveekgdlaellaanlgvekvdlircggdnlvaagreqwndgsntltia
pgvvvvynrntitnaileskglklikihgselvrgrggprcmsmpferedi

    Sequence, based on observed residues (ATOM records): (download) 
    >4bofF (F:)
aqtpihvyseigklkkvllhrpgkeienlmpdylerllfddipfledaqkehdafaqalr
degievlyletlaaeslvtpeireafideylseanirgratkkairellmaiednqelie
ktmagvqkselpeipasekgltdlvesnypfaidpmpnlyftrdpfatigtgvslnhmfs
etrnretlygkyifthhpiygggkvpmvydrnettrieggdelvlskdvlavgisqrtda
asiekllvnifkqnlgfkkvlafefannrkfmhldtvftmvdydkftihpeiegdlrvys
vtydneelhiveekgdlaellaanlgvekvdlircggdnlvaagreqwndgsntltiapg
vvvvynrntitnaileskglklikihgselvrgrggprcmsmpferedi

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >4bofG (G:)
mtaqtpihvyseigklkkvllhrpgkeienlmpdylerllfddipfledaqkehdafaqa
lrdegievlyletlaaeslvtpeireafideylseanirgratkkairellmaiednqel
iektmagvqkselpeipasekgltdlvesnypfaidpmpnlyftrdpfatigtgvslnhm
fsetrnretlygkyifthhpiygggkvpmvydrnettrieggdelvlskdvlavgisqrt
daasiekllvnifkqnlgfkkvlafefannrkfmhldtvftmvdydkftihpeiegdlrv
ysvtydneelhiveekgdlaellaanlgvekvdlircggdnlvaagreqwndgsntltia
pgvvvvynrntitnaileskglklikihgselvrgrggprcmsmpferedi

    Sequence, based on observed residues (ATOM records): (download) 
    >4bofG (G:)
qtpihvyseigklkkvllhrpgkeienlmpdylerllfddipfledaqkehdafaqalrd
egievlyletlaaeslvtpeireafideylseanirgratkkairellmaiednqeliek
tmagvqkselpeipasekgltdlvesnypfaidpmpnlyftrdpfatigtgvslnhmfse
trnretlygkyifthhpiygggkvpmvydrnettrieggdelvlskdvlavgisqrtdaa
siekllvnifkqnlgfkkvlafefannrkfmhldtvftmvdydkftihpeiegdlrvysv
tydneelhiveekgdlaellaanlgvekvdlircggdnlvaagreqwndgsntltiapgv
vvvynrntitnaileskglklikihgselvrgrggprcmsmpferedi

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >4bofH (H:)
mtaqtpihvyseigklkkvllhrpgkeienlmpdylerllfddipfledaqkehdafaqa
lrdegievlyletlaaeslvtpeireafideylseanirgratkkairellmaiednqel
iektmagvqkselpeipasekgltdlvesnypfaidpmpnlyftrdpfatigtgvslnhm
fsetrnretlygkyifthhpiygggkvpmvydrnettrieggdelvlskdvlavgisqrt
daasiekllvnifkqnlgfkkvlafefannrkfmhldtvftmvdydkftihpeiegdlrv
ysvtydneelhiveekgdlaellaanlgvekvdlircggdnlvaagreqwndgsntltia
pgvvvvynrntitnaileskglklikihgselvrgrggprcmsmpferedi

    Sequence, based on observed residues (ATOM records): (download) 
    >4bofH (H:)
qtpihvyseigklkkvllhrpgkeienlmpdylerllfddipfledaqkehdafaqalrd
egievlyletlaaeslvtpeireafideylseanirgratkkairellmaiednqeliek
tmagvqkselpeipasekgltdlvesnypfaidpmpnlyftrdpfatigtgvslnhmfse
trnretlygkyifthhpiygggkvpmvydrnettrieggdelvlskdvlavgisqrtdaa
siekllvnifkqnlgfkkvlafefannrkfmhldtvftmvdydkftihpeiegdlrvysv
tydneelhiveekgdlaellaanlgvekvdlircggdnlvaagreqwndgsntltiapgv
vvvynrntitnaileskglklikihgselvrgrggprcmsmpferedi