PDB entry 4avs
View 4avs on RCSB PDB site
Description: Structure of N-Acetyl-L-Proline bound to Serum Amyloid P Component
Class: sugar binding protein
Keywords: sugar binding protein, glycoprotein, disulfide bond, lectin, metal-binding
Deposited on
2012-05-29, released
2013-06-19
The last revision prior to the SCOPe 2.06 freeze date was dated
2015-02-25, with a file datestamp of
2015-02-20.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: 0.1443
AEROSPACI score: 0.63
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: serum amyloid p-component
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4avsa_ - Chain 'B':
Compound: serum amyloid p-component
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4avsb_ - Chain 'C':
Compound: serum amyloid p-component
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4avsc_ - Chain 'D':
Compound: serum amyloid p-component
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4avsd_ - Chain 'E':
Compound: serum amyloid p-component
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4avse_ - Heterogens: NAG, CA, N7P, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>4avsA (A:)
htdlsgkvfvfpresvtdhvnlitplekplqnftlcfraysdlsrayslfsyntqgrdne
llvykervgeyslyigrhkvtskviekfpapvhicvswesssgiaefwingtplvkkglr
qgyfveaqpkivlgqeqdsyggkfdrsqsfvgeigdlymwdsvlppenilsayqgtplpa
nildwqalnyeirgyviikplvwv
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>4avsB (B:)
htdlsgkvfvfpresvtdhvnlitplekplqnftlcfraysdlsrayslfsyntqgrdne
llvykervgeyslyigrhkvtskviekfpapvhicvswesssgiaefwingtplvkkglr
qgyfveaqpkivlgqeqdsyggkfdrsqsfvgeigdlymwdsvlppenilsayqgtplpa
nildwqalnyeirgyviikplvwv
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>4avsC (C:)
htdlsgkvfvfpresvtdhvnlitplekplqnftlcfraysdlsrayslfsyntqgrdne
llvykervgeyslyigrhkvtskviekfpapvhicvswesssgiaefwingtplvkkglr
qgyfveaqpkivlgqeqdsyggkfdrsqsfvgeigdlymwdsvlppenilsayqgtplpa
nildwqalnyeirgyviikplvwv
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>4avsD (D:)
htdlsgkvfvfpresvtdhvnlitplekplqnftlcfraysdlsrayslfsyntqgrdne
llvykervgeyslyigrhkvtskviekfpapvhicvswesssgiaefwingtplvkkglr
qgyfveaqpkivlgqeqdsyggkfdrsqsfvgeigdlymwdsvlppenilsayqgtplpa
nildwqalnyeirgyviikplvwv
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>4avsE (E:)
htdlsgkvfvfpresvtdhvnlitplekplqnftlcfraysdlsrayslfsyntqgrdne
llvykervgeyslyigrhkvtskviekfpapvhicvswesssgiaefwingtplvkkglr
qgyfveaqpkivlgqeqdsyggkfdrsqsfvgeigdlymwdsvlppenilsayqgtplpa
nildwqalnyeirgyviikplvwv