PDB entry 4apt

View 4apt on RCSB PDB site
Description: The structure of the AXH domain of ataxin-1.
Class: RNA binding protein
Keywords: RNA binding protein, RNA binding, ob-fold, high mobility group homology, hmg, dimerization
Deposited on 2012-04-05, released 2013-03-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2013-04-17, with a file datestamp of 2013-04-12.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.2385
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ataxin-1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P54253 (3-125)
      • expression tag (1-2)
    Domains in SCOPe 2.08: d4apta1, d4apta2
  • Chain 'B':
    Compound: ataxin-1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P54253 (3-125)
      • expression tag (1-2)
    Domains in SCOPe 2.08: d4aptb1, d4aptb2
  • Chain 'C':
    Compound: ataxin-1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P54253 (3-125)
      • expression tag (1-2)
    Domains in SCOPe 2.08: d4aptc1, d4aptc2
  • Chain 'D':
    Compound: ataxin-1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P54253 (3-End)
      • expression tag (1-2)
    Domains in SCOPe 2.08: d4aptd1, d4aptd2
  • Heterogens: NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4aptA (A:)
gamapptlppyfmkgsiiqlangelkkvedlktedfiqsaeisndlkidsstveriedsh
spgvaviqfavgehraqvsvevlveypffvfgqgwssccpertsqlfdlpcsklsvgdvc
isltlk

    Sequence, based on observed residues (ATOM records): (download) 
    >4aptA (A:)
amapptlppyfmkgsiiqlangelkkvedlktedfiqsaeisndlkidsstveriedshs
pgvaviqfavgehraqvsvevlveypffvfgqgwssccpertsqlfdlpcsklsvgdvci
sltlk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4aptB (B:)
gamapptlppyfmkgsiiqlangelkkvedlktedfiqsaeisndlkidsstveriedsh
spgvaviqfavgehraqvsvevlveypffvfgqgwssccpertsqlfdlpcsklsvgdvc
isltlk

    Sequence, based on observed residues (ATOM records): (download) 
    >4aptB (B:)
amapptlppyfmkgsiiqlangelkkvedlktedfiqsaeisndlkidsstveriedshs
pgvaviqfavgehraqvsvevlveypffvfgqgwssccpertsqlfdlpcsklsvgdvci
sltlk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4aptC (C:)
gamapptlppyfmkgsiiqlangelkkvedlktedfiqsaeisndlkidsstveriedsh
spgvaviqfavgehraqvsvevlveypffvfgqgwssccpertsqlfdlpcsklsvgdvc
isltlk

    Sequence, based on observed residues (ATOM records): (download) 
    >4aptC (C:)
amapptlppyfmkgsiiqlangelkkvedlktedfiqsaeisndlkidsstveriedshs
pgvaviqfavgehraqvsvevlveypffvfgqgwssccpertsqlfdlpcsklsvgdvci
sltlk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4aptD (D:)
gamapptlppyfmkgsiiqlangelkkvedlktedfiqsaeisndlkidsstveriedsh
spgvaviqfavgehraqvsvevlveypffvfgqgwssccpertsqlfdlpcsklsvgdvc
isltlk

    Sequence, based on observed residues (ATOM records): (download) 
    >4aptD (D:)
amapptlppyfmkgsiiqlangelkkvedlktedfiqsaeisndlkidsstveriedshs
pgvaviqfavgehraqvsvevlveypffvfgqgwssccpertsqlfdlpcsklsvgdvci
sltl