PDB entry 4aiz

View 4aiz on RCSB PDB site
Description: Crystallographic structure of 3mJL2 from the germinal line lambda 3
Class: immune system
Keywords: immune system, amyloidosis
Deposited on 2012-02-15, released 2013-03-06
The last revision prior to the SCOPe 2.04 freeze date was dated 2013-03-06, with a file datestamp of 2013-03-01.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: 0.1689
AEROSPACI score: 0.55 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: v2-17 protein
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5NV90 (Start-95)
      • conflict (4)
    • PDB 4AIZ (96-107)
    Domains in SCOPe 2.04: d4aiza_
  • Chain 'B':
    Compound: v2-17 protein
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5NV90 (Start-95)
      • conflict (4)
    • PDB 4AIZ (96-107)
    Domains in SCOPe 2.04: d4aizb_
  • Chain 'C':
    Compound: v2-17 protein
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5NV90 (Start-95)
      • conflict (4)
    • PDB 4AIZ (96-107)
    Domains in SCOPe 2.04: d4aizc_
  • Chain 'D':
    Compound: v2-17 protein
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5NV90 (Start-95)
      • conflict (4)
    • PDB 4AIZ (96-107)
    Domains in SCOPe 2.04: d4aizd_
  • Heterogens: SO4, CIT, 88Q, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4aizA (A:)
syelmqppsvsvspgqtaritcsgdalpkqyaywyqqkpgqapvlviykdserpsgiper
fsgsssgttvtltisgvqaedeadyycqsadssgtyvvfgggtkltvl

    Sequence, based on observed residues (ATOM records): (download) 
    >4aizA (A:)
yelmqppsvsvspgqtaritcsgdalpkqyaywyqqkpgqapvlviykdserpsgiperf
sgsssgttvtltisgvqaedeadyycqsadssgtyvvfgggtkltvl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4aizB (B:)
syelmqppsvsvspgqtaritcsgdalpkqyaywyqqkpgqapvlviykdserpsgiper
fsgsssgttvtltisgvqaedeadyycqsadssgtyvvfgggtklvvl

    Sequence, based on observed residues (ATOM records): (download) 
    >4aizB (B:)
elmqppsvsvspgqtaritcsgdalpkqyaywyqqkpgqapvlviykdserpsgiperfs
gsssgttvtltisgvqaedeadyycqsadssgtyvvfgggtklvvl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4aizC (C:)
syelmqppsvsvspgqtaritcsgdalpkqyaywyqqkpgqapvlviykdserpsgiper
fsgsssgttvtltisgvqaedeadyycqsadssgtyvvfgggtkltvl

    Sequence, based on observed residues (ATOM records): (download) 
    >4aizC (C:)
yelmqppsvsvspgqtaritcsgdalpkqyaywyqqkpgqapvlviykdserpsgiperf
sgsssgttvtltisgvqaedeadyycqsadssgtyvvfgggtkltvl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4aizD (D:)
syelmqppsvsvspgqtaritcsgdalpkqyaywyqqkpgqapvlviykdserpsgiper
fsgsssgttvtltisgvqaedeadyycqsadssgtyvvfgggtkltvl

    Sequence, based on observed residues (ATOM records): (download) 
    >4aizD (D:)
elmqppsvsvspgqtaritcsgdalpkqyaywyqqkpgqapvlviykdserpsgiperfs
gsssgttvtltisgvqaedeadyycqsadssgtyvvfgggtkltvl