PDB entry 4aia

View 4aia on RCSB PDB site
Description: The structural basis of 3-methyladenine recognition by 3- methyladenine DNA glycosylase I (TAG) from Staphylococcus aureus
Class: hydrolase
Keywords: hydrolase, 3-methyladenine recognition, DNA repair
Deposited on 2012-02-08, released 2012-02-22
The last revision prior to the SCOPe 2.08 freeze date was dated 2012-06-20, with a file datestamp of 2012-06-15.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.18045
AEROSPACI score: 0.53 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA-3-methyladenine glycosylase I
    Species: STAPHYLOCOCCUS AUREUS [TaxId:1280]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6G8R1 (2-187)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d4aiaa1, d4aiaa2
  • Chain 'B':
    Compound: DNA-3-methyladenine glycosylase I
    Species: STAPHYLOCOCCUS AUREUS [TaxId:1280]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4aiab_
  • Chain 'C':
    Compound: DNA-3-methyladenine glycosylase I
    Species: STAPHYLOCOCCUS AUREUS [TaxId:1280]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4aiac_
  • Chain 'D':
    Compound: DNA-3-methyladenine glycosylase I
    Species: STAPHYLOCOCCUS AUREUS [TaxId:1280]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6G8R1 (2-187)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d4aiad1, d4aiad2
  • Chain 'E':
    Compound: DNA-3-methyladenine glycosylase I
    Species: STAPHYLOCOCCUS AUREUS [TaxId:1280]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6G8R1 (2-187)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d4aiae1, d4aiae2
  • Heterogens: ZN, ADK, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >4aiaA (A:)
    gamnecafgtkdpvylnyhdhvwgqplydskalfkllalesqhaglswltilkkkeayee
    afydfepekvaqmtaqdidrlmtfpnivhhrkkleaivnqaqgylkieqaygsfskflws
    yvngkpkdlqyehasdritvddtatqlskdlkqygfkflgpvtvfsfleaaglydahlkd
    cpskpkhn
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4aiaB (B:)
    gamnecafgtkdpvylnyhdhvwgqplydskalfkllalesqhaglswltilkkkeayee
    afydfepekvaqmtaqdidrlmtfpnivhhrkkleaivnqaqgylkieqaygsfskflws
    yvngkpkdlqyehasdritvddtatqlskdlkqygfkflgpvtvfsfleaaglydahlkd
    cpskpkhn
    

    Sequence, based on observed residues (ATOM records): (download)
    >4aiaB (B:)
    mnecafgtkdpvylnyhdhvwgqplydskalfkllalesqhaglswltilkkkeayeeaf
    ydfepekvaqmtaqdidrlmtfpnivhhrkkleaivnqaqgylkieqaygsfskflwsyv
    ngkpkdlqyehasdritvddtatqlskdlkqygfkflgpvtvfsfleaaglydahlkdcp
    skpkh
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4aiaC (C:)
    gamnecafgtkdpvylnyhdhvwgqplydskalfkllalesqhaglswltilkkkeayee
    afydfepekvaqmtaqdidrlmtfpnivhhrkkleaivnqaqgylkieqaygsfskflws
    yvngkpkdlqyehasdritvddtatqlskdlkqygfkflgpvtvfsfleaaglydahlkd
    cpskpkhn
    

    Sequence, based on observed residues (ATOM records): (download)
    >4aiaC (C:)
    mnecafgtkdpvylnyhdhvwgqplydskalfkllalesqhaglswltilkkkeayeeaf
    ydfepekvaqmtaqdidrlmtfpnivhhrkkleaivnqaqgylkieqaygsfskflwsyv
    ngkpkdlqyehasdritvddtatqlskdlkqygfkflgpvtvfsfleaaglydahlkdcp
    skpkhn
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >4aiaD (D:)
    gamnecafgtkdpvylnyhdhvwgqplydskalfkllalesqhaglswltilkkkeayee
    afydfepekvaqmtaqdidrlmtfpnivhhrkkleaivnqaqgylkieqaygsfskflws
    yvngkpkdlqyehasdritvddtatqlskdlkqygfkflgpvtvfsfleaaglydahlkd
    cpskpkhn
    

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download)
    >4aiaE (E:)
    gamnecafgtkdpvylnyhdhvwgqplydskalfkllalesqhaglswltilkkkeayee
    afydfepekvaqmtaqdidrlmtfpnivhhrkkleaivnqaqgylkieqaygsfskflws
    yvngkpkdlqyehasdritvddtatqlskdlkqygfkflgpvtvfsfleaaglydahlkd
    cpskpkhn