PDB entry 3zmv

View 3zmv on RCSB PDB site
Description: LSD1-CoREST in complex with PLSFLV peptide
Class: transcription
Keywords: transcription, transcription factor, chromatin
Deposited on 2013-02-12, released 2013-06-12
The last revision prior to the SCOPe 2.05 freeze date was dated 2013-08-28, with a file datestamp of 2013-08-23.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.22531
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Lysine-specific histone demethylase 1A
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3zmva1, d3zmva2, d3zmva3
  • Chain 'B':
    Compound: rest corepressor 1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3zmvb1, d3zmvb2
  • Chain 'C':
    Compound: pksflv peptide
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3ZMV (0-5)
  • Chain 'D':
    Compound: pksflv peptide
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 3ZMV (Start-5)
  • Heterogens: FAD

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3zmvA (A:)
mlsgkkaaaaaaaaaaaatgteagpgtaggsengsevaaqpaglsgpaevgpgavgertp
rkkepprasppgglaeppgsagpqagptvvpgsatpmetgiaetpegrrtsrrkrakvey
remdeslanlsedeyyseeernakaekekklpppppqappeeenesepeepsgqagglqd
dssggygdgqasgvegaafqsrlphdrmtsqeaacfpdiisgpqqtqkvflfirnrtlql
wldnpkiqltfeatlqqleapynsdtvlvhrvhsylerhglinfgiykrikplptkktgk
viiigsgvsglaaarqlqsfgmdvtlleardrvggrvatfrkgnyvadlgamvvtglggn
pmavvskqvnmelakikqkcplyeangqavpkekdemveqefnrlleatsylshqldfnv
lnnkpvslgqalevviqlqekhvkdeqiehwkkivktqeelkellnkmvnlkekikelhq
qykeasevkpprditaeflvkskhrdltalckeydelaetqgkleeklqeleanppsdvy
lssrdrqildwhfanlefanatplstlslkhwdqdddfeftgshltvrngyscvpvalae
gldiklntavrqvrytasgceviavntrstsqtfiykcdavlctlplgvlkqqppavqfv
pplpewktsavqrmgfgnlnkvvlcfdrvfwdpsvnlfghvgsttasrgelflfwnlyka
pillalvageaagimenisddvivgrclailkgifgssavpqpketvvsrwradpwargs
ysyvaagssgndydlmaqpitpgpsipgapqpiprlffagehtirnypatvhgallsglr
eagriadqflgamytlprqatpgvpaqqspsm

    Sequence, based on observed residues (ATOM records): (download) 
    >3zmvA (A:)
sgvegaafqsrlphdrmtsqeaacfpdiisgpqqtqkvflfirnrtlqlwldnpkiqltf
eatlqqleapynsdtvlvhrvhsylerhglinfgiykrikplptkktgkviiigsgvsgl
aaarqlqsfgmdvtlleardrvggrvatfrkgnyvadlgamvvtglggnpmavvskqvnm
elakikqkcplyeangqavpkekdemveqefnrlleatsylshqldfnvlnnkpvslgqa
levviqlqekhvkdeqiehwkkivktqeelkellnkmvnlkekikelhqqykeasevkpp
rditaeflvkskhrdltalckeydelaetqgkleeklqeleanppsdvylssrdrqildw
hfanlefanatplstlslkhwdqdddfeftgshltvrngyscvpvalaegldiklntavr
qvrytasgceviavntrstsqtfiykcdavlctlplgvlkqqppavqfvpplpewktsav
qrmgfgnlnkvvlcfdrvfwdpsvnlfghvgsttasrgelflfwnlykapillalvagea
agimenisddvivgrclailkgifgssavpqpketvvsrwradpwargsysyvaagssgn
dydlmaqpitpgpsipgapqpiprlffagehtirnypatvhgallsglreagriadqflg
amytl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3zmvB (B:)
mvekgpevsgkrrgrnnaaasasaaaasaaasaacaspaataasgaaassasaaaasaaa
apnngqnkslaaaapngnsssnsweegssgsssdeehggggmrvgpqyqavvpdfdpakl
arrsqerdnlgmlvwspnqnlseakldeyiaiakekhgynmeqalgmlfwhkhnieksla
dlpnftpfpdewtvedkvlfeqafsfhgktfhriqqmlpdksiaslvkfyyswkktrtkt
svmdrharkqkrereesedeleeangnnpidievdqnkeskkevpptetvpqvkkekhst
qaknrakrkppkgmflsqedveavsanataattvlrqldmelvsvkrqiqnikqtnsalk
ekldggiepyrlpeviqkcnarwtteeqllavqairkygrdfqaisdvignksvvqvknf
fvnyrrrfnidevlqeweaehgkeetngpsnqkpvkspdnsikmpeeedeapvldvryas
as

    Sequence, based on observed residues (ATOM records): (download) 
    >3zmvB (B:)
rkppkgmflsqedveavsanataattvlrqldmelvsvkrqiqnikqtnsalkekldggi
epyrlpeviqkcnarwtteeqllavqairkygrdfqaisdvignksvvqvknffvnyrrr
fnidevlqeweae

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.