PDB entry 3zby

View 3zby on RCSB PDB site
Description: Ligand-free structure of CYP142 from Mycobacterium smegmatis
Class: oxidoreductase
Keywords: oxidoreductase, cyp142, cholesterol metabolism
Deposited on 2012-11-13, released 2013-02-27
The last revision prior to the SCOPe 2.07 freeze date was dated 2013-08-14, with a file datestamp of 2013-08-09.
Experiment type: XRAY
Resolution: 1.93 Å
R-factor: 0.19177
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: p450 heme-thiolate protein
    Species: MYCOBACTERIUM SMEGMATIS [TaxId:1772]
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0R4Q6 (Start-400)
      • expression tag (401-402)
    Domains in SCOPe 2.07: d3zbya1, d3zbya2
  • Chain 'B':
    Compound: p450 heme-thiolate protein
    Species: MYCOBACTERIUM SMEGMATIS [TaxId:1772]
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0R4Q6 (Start-400)
      • expression tag (401-404)
    Domains in SCOPe 2.07: d3zbyb1, d3zbyb2
  • Chain 'C':
    Compound: p450 heme-thiolate protein
    Species: MYCOBACTERIUM SMEGMATIS [TaxId:1772]
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0R4Q6 (Start-400)
      • expression tag (401-402)
    Domains in SCOPe 2.07: d3zbyc1, d3zbyc2
  • Chain 'D':
    Compound: p450 heme-thiolate protein
    Species: MYCOBACTERIUM SMEGMATIS [TaxId:1772]
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0R4Q6 (Start-400)
      • expression tag (401-402)
    Domains in SCOPe 2.07: d3zbyd1, d3zbyd2
  • Chain 'E':
    Compound: p450 heme-thiolate protein
    Species: MYCOBACTERIUM SMEGMATIS [TaxId:1772]
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0R4Q6 (Start-400)
      • expression tag (401-402)
    Domains in SCOPe 2.07: d3zbye1, d3zbye2
  • Chain 'F':
    Compound: p450 heme-thiolate protein
    Species: MYCOBACTERIUM SMEGMATIS [TaxId:1772]
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0R4Q6 (Start-400)
      • expression tag (401-402)
    Domains in SCOPe 2.07: d3zbyf1, d3zbyf2
  • Heterogens: HEM, BCD, SO4, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3zbyA (A:)
mtqmltrpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpe
lfsstggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidav
cergecdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmd
tfaayteftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrh
tlsggteqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelra
gekimlmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmterv
lrrlpdlrladdapvplrpanfvsgpesmpvvftpsapvlahhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3zbyA (A:)
tqmltrpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpel
fsstggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidavc
ergecdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmdt
faayteftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrht
lsggteqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelrag
ekimlmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmtervl
rrlpdlrladdapvplrpanfvsgpesmpvvftpsapvlahh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3zbyB (B:)
mtqmltrpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpe
lfsstggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidav
cergecdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmd
tfaayteftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrh
tlsggteqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelra
gekimlmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmterv
lrrlpdlrladdapvplrpanfvsgpesmpvvftpsapvlahhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3zbyB (B:)
tqmltrpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpel
fsstggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidavc
ergecdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmdt
faayteftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrht
lsggteqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelrag
ekimlmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmtervl
rrlpdlrladdapvplrpanfvsgpesmpvvftpsapvlahhhh

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3zbyC (C:)
mtqmltrpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpe
lfsstggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidav
cergecdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmd
tfaayteftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrh
tlsggteqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelra
gekimlmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmterv
lrrlpdlrladdapvplrpanfvsgpesmpvvftpsapvlahhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3zbyC (C:)
tqmltrpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpel
fsstggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidavc
ergecdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmdt
faayteftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrht
lsggteqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelrag
ekimlmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmtervl
rrlpdlrladdapvplrpanfvsgpesmpvvftpsapvlahh

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3zbyD (D:)
mtqmltrpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpe
lfsstggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidav
cergecdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmd
tfaayteftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrh
tlsggteqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelra
gekimlmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmterv
lrrlpdlrladdapvplrpanfvsgpesmpvvftpsapvlahhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3zbyD (D:)
tqmltrpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpel
fsstggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidavc
ergecdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmdt
faayteftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrht
lsggteqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelrag
ekimlmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmtervl
rrlpdlrladdapvplrpanfvsgpesmpvvftpsapvlahh

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3zbyE (E:)
mtqmltrpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpe
lfsstggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidav
cergecdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmd
tfaayteftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrh
tlsggteqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelra
gekimlmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmterv
lrrlpdlrladdapvplrpanfvsgpesmpvvftpsapvlahhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3zbyE (E:)
tqmltrpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpel
fsstggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidavc
ergecdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmdt
faayteftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrht
lsggteqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelrag
ekimlmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmtervl
rrlpdlrladdapvplrpanfvsgpesmpvvftpsapvlahh

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3zbyF (F:)
mtqmltrpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpe
lfsstggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidav
cergecdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmd
tfaayteftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrh
tlsggteqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelra
gekimlmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmterv
lrrlpdlrladdapvplrpanfvsgpesmpvvftpsapvlahhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3zbyF (F:)
tqmltrpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpel
fsstggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidavc
ergecdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmdt
faayteftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrht
lsggteqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelrag
ekimlmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmtervl
rrlpdlrladdapvplrpanfvsgpesmpvvftpsapvlahh