SCOPe 2.06: Structural Classification of Proteins

PDB entry 3xim

View 3xim on RCSB PDB site
Description: arginine residues as stabilizing elements in proteins
Class: isomerase(intramolecular oxidoreductse)
Keywords: isomerase(intramolecular oxidoreductse)
Deposited on 1991-05-29, released 1993-04-15
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.149
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: d-xylose isomerase
Species: Actinoplanes missouriensis [TaxId:1866]
Database cross-references and differences (RAF-indexed):
- Uniprot P12851 (Start-392)
  - conflict (307)
  - conflict (317)
  - conflict (321)
Domains in SCOPe 2.06: d3xima_
Chain 'B':
Compound: d-xylose isomerase
Species: Actinoplanes missouriensis [TaxId:1866]
Database cross-references and differences (RAF-indexed):
- Uniprot P12851 (Start-392)
  - conflict (307)
  - conflict (317)
  - conflict (321)
Domains in SCOPe 2.06: d3ximb_
Chain 'C':
Compound: d-xylose isomerase
Species: Actinoplanes missouriensis [TaxId:1866]
Database cross-references and differences (RAF-indexed):
- Uniprot P12851 (Start-392)
  - conflict (307)
  - conflict (317)
  - conflict (321)
Domains in SCOPe 2.06: d3ximc_
Chain 'D':
Compound: d-xylose isomerase
Species: Actinoplanes missouriensis [TaxId:1866]
Database cross-references and differences (RAF-indexed):
- Uniprot P12851 (Start-392)
  - conflict (307)
  - conflict (317)
  - conflict (321)
Domains in SCOPe 2.06: d3ximd_
Heterogens: SOR, CO, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>3ximA (A:)
svqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpf
gsdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlr
qmdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaie
pkpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkkl
fhidlngqhgpkfdqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedy
dgvwesaranirmylllrerarafradpevqealaaskvaelktptlnpgegyaelladr
safedydadavgakgfgfvklnqlaiehllgar

Sequence, based on observed residues (ATOM records): (download)

>3ximA (A:)
qatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpfgs
daqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlrqm
dlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaiepk
pneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkklfh
idlngqhgpkfdqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedydg
vwesaranirmylllrerarafradpevqealaaskvaelktptlnpgegyaelladrsa
fedydadavgakgfgfvklnqlaiehllgar

Chain 'B':
Sequence, based on SEQRES records: (download)

>3ximB (B:)
svqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpf
gsdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlr
qmdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaie
pkpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkkl
fhidlngqhgpkfdqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedy
dgvwesaranirmylllrerarafradpevqealaaskvaelktptlnpgegyaelladr
safedydadavgakgfgfvklnqlaiehllgar

Sequence, based on observed residues (ATOM records): (download)

>3ximB (B:)
vqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpfg
sdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlrq
mdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaiep
kpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkklf
hidlngqhgpkfdqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedyd
gvwesaranirmylllrerarafradpevqealaaskvaelktptlnpgegyaelladrs
afedydadavgakgfgfvklnqlaiehllgar

Chain 'C':
Sequence, based on SEQRES records: (download)

>3ximC (C:)
svqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpf
gsdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlr
qmdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaie
pkpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkkl
fhidlngqhgpkfdqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedy
dgvwesaranirmylllrerarafradpevqealaaskvaelktptlnpgegyaelladr
safedydadavgakgfgfvklnqlaiehllgar

Sequence, based on observed residues (ATOM records): (download)

>3ximC (C:)
atredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpfgsd
aqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlrqmd
lgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaiepkp
neprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkklfhi
dlngqhgpkfdqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedydgv
wesaranirmylllrerarafradpevqealaaskvaelktptlnpgegyaelladrsaf
edydadavgakgfgfvklnqlaiehllgar

Chain 'D':
Sequence, based on SEQRES records: (download)

>3ximD (D:)
svqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpf
gsdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlr
qmdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaie
pkpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkkl
fhidlngqhgpkfdqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedy
dgvwesaranirmylllrerarafradpevqealaaskvaelktptlnpgegyaelladr
safedydadavgakgfgfvklnqlaiehllgar

Sequence, based on observed residues (ATOM records): (download)

>3ximD (D:)
vqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpfg
sdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlrq
mdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaiep
kpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkklf
hidlngqhgpkfdqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedyd
gvwesaranirmylllrerarafradpevqealaaskvaelktptlnpgegyaelladrs
afedydadavgakgfgfvklnqlaiehllgar