PDB entry 3xim

View 3xim on RCSB PDB site
Description: arginine residues as stabilizing elements in proteins
Class: isomerase(intramolecular oxidoreductse)
Keywords: isomerase(intramolecular oxidoreductse)
Deposited on 1991-05-29, released 1993-04-15
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.149
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: d-xylose isomerase
    Species: Actinoplanes missouriensis [TaxId:1866]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12851 (Start-392)
      • conflict (307)
      • conflict (317)
      • conflict (321)
    Domains in SCOPe 2.07: d3xima_
  • Chain 'B':
    Compound: d-xylose isomerase
    Species: Actinoplanes missouriensis [TaxId:1866]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12851 (Start-392)
      • conflict (307)
      • conflict (317)
      • conflict (321)
    Domains in SCOPe 2.07: d3ximb_
  • Chain 'C':
    Compound: d-xylose isomerase
    Species: Actinoplanes missouriensis [TaxId:1866]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12851 (Start-392)
      • conflict (307)
      • conflict (317)
      • conflict (321)
    Domains in SCOPe 2.07: d3ximc_
  • Chain 'D':
    Compound: d-xylose isomerase
    Species: Actinoplanes missouriensis [TaxId:1866]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12851 (Start-392)
      • conflict (307)
      • conflict (317)
      • conflict (321)
    Domains in SCOPe 2.07: d3ximd_
  • Heterogens: SOR, CO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3ximA (A:)
    svqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpf
    gsdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlr
    qmdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaie
    pkpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkkl
    fhidlngqhgpkfdqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedy
    dgvwesaranirmylllrerarafradpevqealaaskvaelktptlnpgegyaelladr
    safedydadavgakgfgfvklnqlaiehllgar
    

    Sequence, based on observed residues (ATOM records): (download)
    >3ximA (A:)
    qatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpfgs
    daqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlrqm
    dlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaiepk
    pneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkklfh
    idlngqhgpkfdqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedydg
    vwesaranirmylllrerarafradpevqealaaskvaelktptlnpgegyaelladrsa
    fedydadavgakgfgfvklnqlaiehllgar
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3ximB (B:)
    svqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpf
    gsdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlr
    qmdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaie
    pkpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkkl
    fhidlngqhgpkfdqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedy
    dgvwesaranirmylllrerarafradpevqealaaskvaelktptlnpgegyaelladr
    safedydadavgakgfgfvklnqlaiehllgar
    

    Sequence, based on observed residues (ATOM records): (download)
    >3ximB (B:)
    vqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpfg
    sdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlrq
    mdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaiep
    kpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkklf
    hidlngqhgpkfdqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedyd
    gvwesaranirmylllrerarafradpevqealaaskvaelktptlnpgegyaelladrs
    afedydadavgakgfgfvklnqlaiehllgar
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >3ximC (C:)
    svqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpf
    gsdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlr
    qmdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaie
    pkpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkkl
    fhidlngqhgpkfdqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedy
    dgvwesaranirmylllrerarafradpevqealaaskvaelktptlnpgegyaelladr
    safedydadavgakgfgfvklnqlaiehllgar
    

    Sequence, based on observed residues (ATOM records): (download)
    >3ximC (C:)
    atredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpfgsd
    aqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlrqmd
    lgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaiepkp
    neprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkklfhi
    dlngqhgpkfdqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedydgv
    wesaranirmylllrerarafradpevqealaaskvaelktptlnpgegyaelladrsaf
    edydadavgakgfgfvklnqlaiehllgar
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >3ximD (D:)
    svqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpf
    gsdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlr
    qmdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaie
    pkpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkkl
    fhidlngqhgpkfdqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedy
    dgvwesaranirmylllrerarafradpevqealaaskvaelktptlnpgegyaelladr
    safedydadavgakgfgfvklnqlaiehllgar
    

    Sequence, based on observed residues (ATOM records): (download)
    >3ximD (D:)
    vqatredkfsfglwtvgwqardafgdatrtaldpveavhklaeigaygitfhdddlvpfg
    sdaqtrdgiiagfkkaldetglivpmvttnlfthpvfkdggftsndrsvrryairkvlrq
    mdlgaelgaktlvlwggregaeydsakdvsaaldryrealnllaqysedrgyglrfaiep
    kpneprgdillptaghaiafvqelerpelfginpetgheqmsnlnftqgiaqalwhkklf
    hidlngqhgpkfdqdlvfghgdllnafslvdllengpdgapaydgprhfdykpsrtedyd
    gvwesaranirmylllrerarafradpevqealaaskvaelktptlnpgegyaelladrs
    afedydadavgakgfgfvklnqlaiehllgar