PDB entry 3wk0
View 3wk0 on RCSB PDB site
Description: Wild-type orotidine 5'-monophosphate decarboxylase from M. thermoautotrophicus complexed with orotidine 5'-monophosphate methyl ester
Class: lyase
Keywords: protein-ligand complex, TIM barrel, decarboxylase, pyrimidine biosynthesis, LYASE
Deposited on
2013-10-17, released
2013-12-04
The last revision prior to the SCOPe 2.05 freeze date was dated
2013-12-04, with a file datestamp of
2013-11-29.
Experiment type: XRAY
Resolution: 1.41 Å
R-factor: 0.17
AEROSPACI score: 0.61
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: orotidine 5'-phosphate decarboxylase
Species: Methanothermobacter thermautotrophicus [TaxId:145262]
Gene: pyrF, MTH_129
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3wk0a_ - Heterogens: O7M, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3wk0A (A:)
gshmrsrrvdvmdvmnrlilamdlmnrddalrvtgevreyidtvkigyplvlsegmdiia
efrkrfgcriiadfkvadipetnekicratfkagadaiivhgfpgadsvraclnvaeemg
revflltemshpgaemfiqgaadeiarmgvdlgvknyvgpstrperlsrlreiigqdsfl
ispgvgaqggdpgetlrfadaiivgrsiyladnpaaaaagiiesikdlripedpaankar
keaelaaataeq
Sequence, based on observed residues (ATOM records): (download)
>3wk0A (A:)
vmnrlilamdlmnrddalrvtgevreyidtvkigyplvlsegmdiiaefrkrfgcriiad
fkvadipetnekicratfkagadaiivhgfpgadsvraclnvaeemgrevflltemshpg
aemfiqgaadeiarmgvdlgvknyvgpstrperlsrlreiigqdsflispgvgaqggdpg
etlrfadaiivgrsiyladnpaaaaagiiesikdl