PDB entry 3whk

View 3whk on RCSB PDB site
Description: Crystal structure of PAN-Rpt5C chimera
Class: hydrolase
Keywords: Four-helix bundle, Proteasome ATPase subunit, ATP Binding, HYDROLASE
Deposited on 2013-08-26, released 2014-03-26
The last revision prior to the SCOPe 2.03 freeze date was dated 2014-03-26, with a file datestamp of 2014-03-21.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.243
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Proteasome-activating nucleotidase, 26S protease regulatory subunit 6A
    Species: Pyrococcus furiosus, Saccharomyces cerevisiae [TaxId:186497, 559292]
    Gene: pan, PF0115, O3258, RPT5, YOR117W, YOR3258W, YTA1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8U4H3 (4-188)
      • expression tag (3)
    • Uniprot P33297 (191-End)
      • linker (189-190)
  • Chain 'B':
    Compound: Proteasome-activating nucleotidase, 26S protease regulatory subunit 6A
    Species: Pyrococcus furiosus, Saccharomyces cerevisiae [TaxId:186497, 559292]
    Gene: pan, PF0115, O3258, RPT5, YOR117W, YOR3258W, YTA1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8U4H3 (4-188)
      • expression tag (3)
    • Uniprot P33297 (191-End)
      • linker (189-190)
  • Chain 'C':
    Compound: Proteasome-activating nucleotidase, 26S protease regulatory subunit 6A
    Species: Pyrococcus furiosus, Saccharomyces cerevisiae [TaxId:186497, 559292]
    Gene: pan, PF0115, O3258, RPT5, YOR117W, YOR3258W, YTA1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8U4H3 (4-188)
      • expression tag (3)
    • Uniprot P33297 (191-End)
      • linker (189-190)
    Domains in SCOPe 2.03: d3whkc_
  • Chain 'D':
    Compound: Proteasome-activating nucleotidase, 26S protease regulatory subunit 6A
    Species: Pyrococcus furiosus, Saccharomyces cerevisiae [TaxId:186497, 559292]
    Gene: pan, PF0115, O3258, RPT5, YOR117W, YOR3258W, YTA1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8U4H3 (4-188)
      • expression tag (3)
    • Uniprot P33297 (191-End)
      • linker (189-190)
    Domains in SCOPe 2.03: d3whkd_
  • Chain 'E':
    Compound: Proteasome-activating nucleotidase, 26S protease regulatory subunit 6A
    Species: Pyrococcus furiosus, Saccharomyces cerevisiae [TaxId:186497, 559292]
    Gene: pan, PF0115, O3258, RPT5, YOR117W, YOR3258W, YTA1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8U4H3 (4-188)
      • expression tag (3)
    • Uniprot P33297 (191-End)
      • linker (189-190)
    Domains in SCOPe 2.03: d3whke_
  • Chain 'F':
    Compound: Proteasome-activating nucleotidase, 26S protease regulatory subunit 6A
    Species: Pyrococcus furiosus, Saccharomyces cerevisiae [TaxId:186497, 559292]
    Gene: pan, PF0115, O3258, RPT5, YOR117W, YOR3258W, YTA1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8U4H3 (4-188)
      • expression tag (3)
    • Uniprot P33297 (191-End)
      • linker (189-190)
    Domains in SCOPe 2.03: d3whkf_
  • Chain 'G':
    Compound: Proteasome-activating nucleotidase, 26S protease regulatory subunit 6A
    Species: Pyrococcus furiosus, Saccharomyces cerevisiae [TaxId:186497, 559292]
    Gene: pan, PF0115, O3258, RPT5, YOR117W, YOR3258W, YTA1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8U4H3 (4-188)
      • expression tag (3)
    • Uniprot P33297 (191-End)
      • linker (189-190)
  • Chain 'H':
    Compound: Proteasome-activating nucleotidase, 26S protease regulatory subunit 6A
    Species: Pyrococcus furiosus, Saccharomyces cerevisiae [TaxId:186497, 559292]
    Gene: pan, PF0115, O3258, RPT5, YOR117W, YOR3258W, YTA1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8U4H3 (4-188)
      • expression tag (3)
    • Uniprot P33297 (191-End)
      • linker (189-190)
  • Heterogens: ATP, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3whkC (C:)
gshmgfevverpnvtyndigglkkqlqelreaielplkhpelfeevgidppkgvllygpp
gcgktlmakaiahevnatfirvvgselvrkyigegarlvhelfelakekaptiifideid
aigakrldettggerevnrtlmqllaemdgfdprgnvkviaatnrpdildpallrpgrfd
rlievplpdefsraqilqihsrkmttdddinwqelarstdefngaqlkavtveagmialr
ngqssvkhedfvegisevqarksksvsfya

    Sequence, based on observed residues (ATOM records): (download) 
    >3whkC (C:)
mgfevverpnvtyndigglkkqlqelreaielplkhpelfeevgidppkgvllygppgcg
ktlmakaiahevnatfirvvgselvregarlvhelfelakekaptiifideidaigaknr
tlmqllaemdgfdprgnvkviaatnrpdildpallrpgrfdrlievplpdefsraqilqi
hsrkmttdddinwqelarstdefngaqlkavtveagmialrngqssvkhedfvegisevq
arksk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3whkD (D:)
gshmgfevverpnvtyndigglkkqlqelreaielplkhpelfeevgidppkgvllygpp
gcgktlmakaiahevnatfirvvgselvrkyigegarlvhelfelakekaptiifideid
aigakrldettggerevnrtlmqllaemdgfdprgnvkviaatnrpdildpallrpgrfd
rlievplpdefsraqilqihsrkmttdddinwqelarstdefngaqlkavtveagmialr
ngqssvkhedfvegisevqarksksvsfya

    Sequence, based on observed residues (ATOM records): (download) 
    >3whkD (D:)
mgfevverpnvtyndigglkkqlqelreaielplkhpelfeevgidppkgvllygppgcg
ktlmakaiahevnatfirvvgselvregarlvhelfelakekaptiifideidaigakvn
rtlmqllaemdgfdprgnvkviaatnrpdildpallrpgrfdrlievplpdefsraqilq
ihsrkmttdddinwqelarstdefngaqlkavtveagmialrngqssvkhedfvegisev
qarks

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3whkE (E:)
gshmgfevverpnvtyndigglkkqlqelreaielplkhpelfeevgidppkgvllygpp
gcgktlmakaiahevnatfirvvgselvrkyigegarlvhelfelakekaptiifideid
aigakrldettggerevnrtlmqllaemdgfdprgnvkviaatnrpdildpallrpgrfd
rlievplpdefsraqilqihsrkmttdddinwqelarstdefngaqlkavtveagmialr
ngqssvkhedfvegisevqarksksvsfya

    Sequence, based on observed residues (ATOM records): (download) 
    >3whkE (E:)
mgfevverpnvtyndigglkkqlqelreaielplkhpelfeevgidppkgvllygppgcg
ktlmakaiahevnatfirvvgselvegarlvhelfelakekaptiifideidaigakevn
rtlmqllaemdgfdprgnvkviaatnrpdildpallrpgrfdrlievplpdefsraqilq
ihsrkmttdddinwqelarstdefngaqlkavtveagmialrngqssvkhedfvegisev
qarksks

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3whkF (F:)
gshmgfevverpnvtyndigglkkqlqelreaielplkhpelfeevgidppkgvllygpp
gcgktlmakaiahevnatfirvvgselvrkyigegarlvhelfelakekaptiifideid
aigakrldettggerevnrtlmqllaemdgfdprgnvkviaatnrpdildpallrpgrfd
rlievplpdefsraqilqihsrkmttdddinwqelarstdefngaqlkavtveagmialr
ngqssvkhedfvegisevqarksksvsfya

    Sequence, based on observed residues (ATOM records): (download) 
    >3whkF (F:)
mgfevverpnvtyndigglkkqlqelreaielplkhpelfeevgidppkgvllygppgcg
ktlmakaiahevnatfirvvgselvregarlvhelfelakekaptiifideidaigakev
nrtlmqllaemdgfdprgnvkviaatnrpdildpallrpgrfdrlievplpdefsraqil
qihsrkmttdddinwqelarstdefngaqlkavtveagmialrngqssvkhedfvegise
vqar

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.