PDB entry 3whd
View 3whd on RCSB PDB site
Description: C-type lectin, human MCL
Class: immune system
Keywords: c-type lectin, carbohydrate recognition, glycolipid binding, Plasmamembrane, IMMUNE SYSTEM
Deposited on
2013-08-24, released
2013-10-23
The last revision prior to the SCOPe 2.08 freeze date was dated
2013-12-11, with a file datestamp of
2013-12-06.
Experiment type: XRAY
Resolution: 2.29 Å
R-factor: 0.178
AEROSPACI score: 0.32
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: C-type lectin domain family 4 member D
Species: Homo sapiens [TaxId:9606]
Gene: CLEC4D
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3whda_ - Chain 'C':
Compound: C-type lectin domain family 4 member D
Species: Homo sapiens [TaxId:9606]
Gene: CLEC4D
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3whdc1, d3whdc2 - Heterogens: CA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3whdA (A:)
mhaklkcikekselksaegstwnccpidwrafqsncyfpltdnktwaeserncsgmgahl
mtisteaeqnfiiqfldrrlsyflglrdenakgqwrwvdqtpfnprrvfwhknepdnsqg
encvvlvynqdkwawndvpcnfeasrickipgttln
Sequence, based on observed residues (ATOM records): (download)
>3whdA (A:)
haklkcikstwnccpidwrafqsncyfpltdnktwaeserncsgmgahlmtisteaeqnf
iiqfldrrlsyflglrdenakgqwrwvdqtpfnprrvfwhknepdnsqgencvvlvynqd
kwawndvpcnfeasrickipgttln
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3whdC (C:)
mhaklkcikekselksaegstwnccpidwrafqsncyfpltdnktwaeserncsgmgahl
mtisteaeqnfiiqfldrrlsyflglrdenakgqwrwvdqtpfnprrvfwhknepdnsqg
encvvlvynqdkwawndvpcnfeasrickipgttln
Sequence, based on observed residues (ATOM records): (download)
>3whdC (C:)
mhaklkcikekstwnccpidwrafqsncyfpltdnktwaeserncsgmgahlmtisteae
qnfiiqfldrrlsyflglrdenakgqwrwvdqtpfnprrvfwhknepdnsqgencvvlvy
nqdkwawndvpcnfeasrickipgttln