PDB entry 3wcu

View 3wcu on RCSB PDB site
Description: The structure of a deoxygenated 400 kda hemoglobin provides a more accurate description of the cooperative mechanism of giant hemoglobins: Deoxygenated form
Class: Oxygen Transport
Keywords: globin fold, oxygen transport, oxygen binding, blood
Deposited on 2013-06-01, released 2014-06-04
The last revision prior to the SCOPe 2.07 freeze date was dated 2014-08-06, with a file datestamp of 2014-08-01.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.246
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: A1 globin chain of giant V2 hemoglobin
    Species: Lamellibrachia satsuma [TaxId:104711]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3wcua_
  • Chain 'B':
    Compound: A2 globin chain of giant V2 hemoglobin
    Species: Lamellibrachia satsuma [TaxId:104711]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3wcub_
  • Chain 'C':
    Compound: B2 globin chain of giant V2 hemoglobin
    Species: Lamellibrachia satsuma [TaxId:104711]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3wcuc_
  • Chain 'D':
    Compound: B1 globin chain of giant V2 hemoglobin
    Species: Lamellibrachia satsuma [TaxId:104711]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3wcud_
  • Chain 'E':
    Compound: A1 globin chain of giant V2 hemoglobin
    Species: Lamellibrachia satsuma [TaxId:104711]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3wcue_
  • Chain 'F':
    Compound: A2 globin chain of giant V2 hemoglobin
    Species: Lamellibrachia satsuma [TaxId:104711]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3wcuf_
  • Chain 'G':
    Compound: B2 globin chain of giant V2 hemoglobin
    Species: Lamellibrachia satsuma [TaxId:104711]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3wcug_
  • Chain 'H':
    Compound: B1 globin chain of giant V2 hemoglobin
    Species: Lamellibrachia satsuma [TaxId:104711]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3wcuh_
  • Heterogens: HEM, CA

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3wcuA (A:)
    dcnilqrlkvkmqwakaygfgterakfgnslwtsifnyapdardlfksvksedmrspqfk
    ahiarviggldrvismfdnedalnadlehlksqhdprgldalnfvvfgkalfatvggqfg
    vcfdlpawescykviamgitgndmfs
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3wcuB (B:)
    secgplqrlkvkrqwaeaygsgngreefghfiwanvfkvapsardmfkrvrgdniytpaf
    rahatrvlggldmcvallddesvlntqlahlasqhssrgvsaeqynvvehavmmgvehei
    gqnvfdkdawqacldvitsgiqgn
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3wcuC (C:)
    ssnscttedrremqlmwanvwsaqftgrrlaiaqavfkdlfahvpdavglfdrvhgteid
    ssefkahcirvvngldsaigllsdpstlneqlshlatqhqeragvtkggfsaiaqsflrv
    mpqvascfnpdawsrcfnritngmteglae
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3wcuD (D:)
    sefcseadativikqwnqiynagigaksrwtmgneifsslfklkpesevlfnnvnvanms
    sgafhahtvrvlsgldmginylndagtltsltahlaaqhvartglkavyfdamgkvlmtv
    lpslidnfnpdawrncllplknaiakglp
    

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3wcuE (E:)
    dcnilqrlkvkmqwakaygfgterakfgnslwtsifnyapdardlfksvksedmrspqfk
    ahiarviggldrvismfdnedalnadlehlksqhdprgldalnfvvfgkalfatvggqfg
    vcfdlpawescykviamgitgndmfs
    

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3wcuF (F:)
    secgplqrlkvkrqwaeaygsgngreefghfiwanvfkvapsardmfkrvrgdniytpaf
    rahatrvlggldmcvallddesvlntqlahlasqhssrgvsaeqynvvehavmmgvehei
    gqnvfdkdawqacldvitsgiqgn
    

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3wcuG (G:)
    ssnscttedrremqlmwanvwsaqftgrrlaiaqavfkdlfahvpdavglfdrvhgteid
    ssefkahcirvvngldsaigllsdpstlneqlshlatqhqeragvtkggfsaiaqsflrv
    mpqvascfnpdawsrcfnritngmteglae
    

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3wcuH (H:)
    sefcseadativikqwnqiynagigaksrwtmgneifsslfklkpesevlfnnvnvanms
    sgafhahtvrvlsgldmginylndagtltsltahlaaqhvartglkavyfdamgkvlmtv
    lpslidnfnpdawrncllplknaiakglp