PDB entry 3w9t

View 3w9t on RCSB PDB site
Description: pore-forming CEL-III
Class: toxin
Keywords: Hemolytic lectin, Pore forming toxin, TOXIN
Deposited on 2013-04-16, released 2014-03-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hemolytic lectin CEL-III
    Species: Cucumaria echinata [TaxId:40245]
    Database cross-references and differences (RAF-indexed):
    • PDB 3W9T (0-431)
    Domains in SCOPe 2.08: d3w9ta1, d3w9ta2, d3w9ta3, d3w9ta4
  • Chain 'B':
    Compound: hemolytic lectin CEL-III
    Species: Cucumaria echinata [TaxId:40245]
    Database cross-references and differences (RAF-indexed):
    • PDB 3W9T (0-431)
    Domains in SCOPe 2.08: d3w9tb1, d3w9tb2, d3w9tb3, d3w9tb4
  • Chain 'C':
    Compound: hemolytic lectin CEL-III
    Species: Cucumaria echinata [TaxId:40245]
    Database cross-references and differences (RAF-indexed):
    • PDB 3W9T (0-431)
    Domains in SCOPe 2.08: d3w9tc1, d3w9tc2, d3w9tc3, d3w9tc4
  • Chain 'D':
    Compound: hemolytic lectin CEL-III
    Species: Cucumaria echinata [TaxId:40245]
    Database cross-references and differences (RAF-indexed):
    • PDB 3W9T (0-431)
    Domains in SCOPe 2.08: d3w9td1, d3w9td2, d3w9td3, d3w9td4
  • Chain 'E':
    Compound: hemolytic lectin CEL-III
    Species: Cucumaria echinata [TaxId:40245]
    Database cross-references and differences (RAF-indexed):
    • PDB 3W9T (0-431)
    Domains in SCOPe 2.08: d3w9te1, d3w9te2, d3w9te3, d3w9te4
  • Chain 'F':
    Compound: hemolytic lectin CEL-III
    Species: Cucumaria echinata [TaxId:40245]
    Database cross-references and differences (RAF-indexed):
    • PDB 3W9T (0-431)
    Domains in SCOPe 2.08: d3w9tf1, d3w9tf2, d3w9tf3, d3w9tf4
  • Chain 'G':
    Compound: hemolytic lectin CEL-III
    Species: Cucumaria echinata [TaxId:40245]
    Database cross-references and differences (RAF-indexed):
    • PDB 3W9T (0-431)
    Domains in SCOPe 2.08: d3w9tg1, d3w9tg2, d3w9tg3, d3w9tg4
  • Heterogens: CA, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3w9tA (A:)
evlctnpldigelrsfkskqcvdivgnqgsgniatydcdglsdqqiiicgdgtirnearn
ycftpdgsgnanvmsspctlypeipssqrwrqgrrktftdnggieqvateiinlasgkcl
diegsdgtgdigvydcqnlddqyfyvrsrgpelfygrlrneksdlcldvegsdgkgnvlm
yscednldqwfryyengeivnaksgmcldvegsdgsgnvgiyrcddlrdqmwsrpnaycn
gdycsflnkesnkcldvsgdqgtgdvgtwqcdglpdqrfkwvfddwevptatwnmvgcdq
ngkvsqqisntisfsstvtagvavevsstiekgvifakatvsvkvtaslskawtnsqsgt
taitytcdnydsdeeftrgcmwqlaiettevksgdllvwnpqivkctrsntapgcapftk
canedctfctdi

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3w9tB (B:)
evlctnpldigelrsfkskqcvdivgnqgsgniatydcdglsdqqiiicgdgtirnearn
ycftpdgsgnanvmsspctlypeipssqrwrqgrrktftdnggieqvateiinlasgkcl
diegsdgtgdigvydcqnlddqyfyvrsrgpelfygrlrneksdlcldvegsdgkgnvlm
yscednldqwfryyengeivnaksgmcldvegsdgsgnvgiyrcddlrdqmwsrpnaycn
gdycsflnkesnkcldvsgdqgtgdvgtwqcdglpdqrfkwvfddwevptatwnmvgcdq
ngkvsqqisntisfsstvtagvavevsstiekgvifakatvsvkvtaslskawtnsqsgt
taitytcdnydsdeeftrgcmwqlaiettevksgdllvwnpqivkctrsntapgcapftk
canedctfctdi

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3w9tC (C:)
evlctnpldigelrsfkskqcvdivgnqgsgniatydcdglsdqqiiicgdgtirnearn
ycftpdgsgnanvmsspctlypeipssqrwrqgrrktftdnggieqvateiinlasgkcl
diegsdgtgdigvydcqnlddqyfyvrsrgpelfygrlrneksdlcldvegsdgkgnvlm
yscednldqwfryyengeivnaksgmcldvegsdgsgnvgiyrcddlrdqmwsrpnaycn
gdycsflnkesnkcldvsgdqgtgdvgtwqcdglpdqrfkwvfddwevptatwnmvgcdq
ngkvsqqisntisfsstvtagvavevsstiekgvifakatvsvkvtaslskawtnsqsgt
taitytcdnydsdeeftrgcmwqlaiettevksgdllvwnpqivkctrsntapgcapftk
canedctfctdi

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3w9tD (D:)
evlctnpldigelrsfkskqcvdivgnqgsgniatydcdglsdqqiiicgdgtirnearn
ycftpdgsgnanvmsspctlypeipssqrwrqgrrktftdnggieqvateiinlasgkcl
diegsdgtgdigvydcqnlddqyfyvrsrgpelfygrlrneksdlcldvegsdgkgnvlm
yscednldqwfryyengeivnaksgmcldvegsdgsgnvgiyrcddlrdqmwsrpnaycn
gdycsflnkesnkcldvsgdqgtgdvgtwqcdglpdqrfkwvfddwevptatwnmvgcdq
ngkvsqqisntisfsstvtagvavevsstiekgvifakatvsvkvtaslskawtnsqsgt
taitytcdnydsdeeftrgcmwqlaiettevksgdllvwnpqivkctrsntapgcapftk
canedctfctdi

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3w9tE (E:)
evlctnpldigelrsfkskqcvdivgnqgsgniatydcdglsdqqiiicgdgtirnearn
ycftpdgsgnanvmsspctlypeipssqrwrqgrrktftdnggieqvateiinlasgkcl
diegsdgtgdigvydcqnlddqyfyvrsrgpelfygrlrneksdlcldvegsdgkgnvlm
yscednldqwfryyengeivnaksgmcldvegsdgsgnvgiyrcddlrdqmwsrpnaycn
gdycsflnkesnkcldvsgdqgtgdvgtwqcdglpdqrfkwvfddwevptatwnmvgcdq
ngkvsqqisntisfsstvtagvavevsstiekgvifakatvsvkvtaslskawtnsqsgt
taitytcdnydsdeeftrgcmwqlaiettevksgdllvwnpqivkctrsntapgcapftk
canedctfctdi

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3w9tF (F:)
evlctnpldigelrsfkskqcvdivgnqgsgniatydcdglsdqqiiicgdgtirnearn
ycftpdgsgnanvmsspctlypeipssqrwrqgrrktftdnggieqvateiinlasgkcl
diegsdgtgdigvydcqnlddqyfyvrsrgpelfygrlrneksdlcldvegsdgkgnvlm
yscednldqwfryyengeivnaksgmcldvegsdgsgnvgiyrcddlrdqmwsrpnaycn
gdycsflnkesnkcldvsgdqgtgdvgtwqcdglpdqrfkwvfddwevptatwnmvgcdq
ngkvsqqisntisfsstvtagvavevsstiekgvifakatvsvkvtaslskawtnsqsgt
taitytcdnydsdeeftrgcmwqlaiettevksgdllvwnpqivkctrsntapgcapftk
canedctfctdi

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3w9tG (G:)
evlctnpldigelrsfkskqcvdivgnqgsgniatydcdglsdqqiiicgdgtirnearn
ycftpdgsgnanvmsspctlypeipssqrwrqgrrktftdnggieqvateiinlasgkcl
diegsdgtgdigvydcqnlddqyfyvrsrgpelfygrlrneksdlcldvegsdgkgnvlm
yscednldqwfryyengeivnaksgmcldvegsdgsgnvgiyrcddlrdqmwsrpnaycn
gdycsflnkesnkcldvsgdqgtgdvgtwqcdglpdqrfkwvfddwevptatwnmvgcdq
ngkvsqqisntisfsstvtagvavevsstiekgvifakatvsvkvtaslskawtnsqsgt
taitytcdnydsdeeftrgcmwqlaiettevksgdllvwnpqivkctrsntapgcapftk
canedctfctdi