PDB entry 3vtk

View 3vtk on RCSB PDB site
Description: thymidine kinase from herpes simplex virus type 1 in complex with ADP and 5-iodo-deoxyuridine-monophosphate
Class: transferase
Keywords: key enzyme in thymidine salvage pathway, additional thymidylate kinase activity, target for anti-herpes viral drugs, transferase
Deposited on 1997-04-01, released 1997-10-22
The last revision prior to the SCOP 1.75 freeze date was dated 1997-10-22, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.222
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Thymidine kinase
    Species: Human herpesvirus 1
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d3vtka_
  • Heterogens: ADP, 5IU, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3vtkA (A:)
qqeatevrpeqkmptllrvyidgphgmgkttttqllvalgsrddivyvpepmtywrvlga
setianiyttqhrldqgeisagdaavvmtsaqitmgmpyavtdavlaphiggeagsshap
ppaltlifdrhpiaallcypaarylmgsmtpqavlafvalipptlpgtnivlgalpedrh
idrlakrqrpgerldlamlaairrvygllantvrylqcggswredwgqlsgtavppqgae
pqsnagprphigdtlftlfrapellapngdlynvfawaldvlakrlrsmhvfildydqsp
agcrdallqltsgmvqthvttpgsipticdlartfaremgean

    Sequence, based on observed residues (ATOM records): (download) 
    >3vtkA (A:)
mptllrvyidgphgmgkttttqllvalgsrddivyvpepmtywrvlgasetianiyttqh
rldqgeisagdaavvmtsaqitmgmpyavtdavlaphiggeagspppaltlifdrhpiaa
llcypaarylmgsmtpqavlafvalipptlpgtnivlgalpedrhidrlakrqrpgerld
lamlaairrvygllantvrylqcggswredwgqlsgprphigdtlftlfrapellapngd
lynvfawaldvlakrlrsmhvfildydqspagcrdallqltsgmvqthvttpgsipticd
lartfaremgean