PDB entry 3vfl

View 3vfl on RCSB PDB site
Description: Structure, Function, Stability and Knockout Phenotype of Dihydrodipicolinate Synthase from Streptococcus pneumoniae
Class: lyase
Keywords: Lyase, Dihydrodipicolinate synthase, Lysine Biosynthesis
Deposited on 2012-01-10, released 2013-06-12
The last revision prior to the SCOPe 2.06 freeze date was dated 2013-06-12, with a file datestamp of 2013-06-07.
Experiment type: XRAY
Resolution: 1.91 Å
R-factor: 0.168
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Dihydrodipicolinate synthase
    Species: Streptococcus pneumoniae [TaxId:406556]
    Gene: CGSSp3BS71_00085, dapA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3vfla_
  • Chain 'B':
    Compound: Dihydrodipicolinate synthase
    Species: Streptococcus pneumoniae [TaxId:406556]
    Gene: CGSSp3BS71_00085, dapA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3vflb_
  • Heterogens: K, GOL, MES, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3vflA (A:)
msyqdlkeckiitafitpfhedgsinfdaipaliehllahhtdgillagttaesptlthd
eelelfaavqkvvngrvpliagvgtndtrdsiefvkevaefggfaaglaivpyynkpsqe
gmyqhfkaiadasdlpiiiynipgrvvveltpetmlrladhpniigvkectslanmayli
ehkpeefliytgedgdafhamnlgadgvisvashtngdemhemftaiaesdmkkaaaiqr
kfipkvnalfsypspapvkailnymgfeagptrlplvpapeedvkriikvvvdgdyeatk
atvtgvlrpdy

    Sequence, based on observed residues (ATOM records): (download) 
    >3vflA (A:)
syqdlkeckiitafitpfhedgsinfdaipaliehllahhtdgillagttaesptlthde
elelfaavqkvvngrvpliagvgtndtrdsiefvkevaefggfaaglaivpyynkpsqeg
myqhfkaiadasdlpiiiynipgrvvveltpetmlrladhpniigvkectslanmaylie
hkpeefliytgedgdafhamnlgadgvisvashtngdemhemftaiaesdmkkaaaiqrk
fipkvnalfsypspapvkailnymgfeagptrlplvpapeedvkriikvvvdgdyeattv
tgvlrpdy

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3vflB (B:)
msyqdlkeckiitafitpfhedgsinfdaipaliehllahhtdgillagttaesptlthd
eelelfaavqkvvngrvpliagvgtndtrdsiefvkevaefggfaaglaivpyynkpsqe
gmyqhfkaiadasdlpiiiynipgrvvveltpetmlrladhpniigvkectslanmayli
ehkpeefliytgedgdafhamnlgadgvisvashtngdemhemftaiaesdmkkaaaiqr
kfipkvnalfsypspapvkailnymgfeagptrlplvpapeedvkriikvvvdgdyeatk
atvtgvlrpdy

    Sequence, based on observed residues (ATOM records): (download) 
    >3vflB (B:)
syqdlkeckiitafitpfhedgsinfdaipaliehllahhtdgillagttaesptlthde
elelfaavqkvvngrvpliagvgtndtrdsiefvkevaefggfaaglaivpyynkpsqeg
myqhfkaiadasdlpiiiynipgrvvveltpetmlrladhpniigvkectslanmaylie
hkpeefliytgedgdafhamnlgadgvisvashtngdemhemftaiaesdmkkaaaiqrk
fipkvnalfsypspapvkailnymgfeagptrlplvpapeedvkriikvvvdgdyetvtg
vlrpdy