PDB entry 3vdp

View 3vdp on RCSB PDB site
Description: Structure and biochemical studies of the recombination mediator protein RecR in RecFOR pathway
Class: recombination
Keywords: Zinc Finger, DNA repair, DNA binding, RECOMBINATION
Deposited on 2012-01-05, released 2012-12-19
The last revision prior to the SCOPe 2.06 freeze date was dated 2012-12-19, with a file datestamp of 2012-12-14.
Experiment type: XRAY
Resolution: 2.45 Å
R-factor: 0.198
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: recombination protein recr
    Species: THERMOANAEROBACTER TENGCONGENSIS [TaxId:273068]
    Gene: recR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3vdpa_
  • Chain 'B':
    Compound: recombination protein recr
    Species: THERMOANAEROBACTER TENGCONGENSIS [TaxId:273068]
    Gene: recR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3vdpb_
  • Chain 'C':
    Compound: recombination protein recr
    Species: THERMOANAEROBACTER TENGCONGENSIS [TaxId:273068]
    Gene: recR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3vdpc_
  • Chain 'D':
    Compound: recombination protein recr
    Species: THERMOANAEROBACTER TENGCONGENSIS [TaxId:273068]
    Gene: recR
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3vdpd_
  • Heterogens: ZN, IMD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3vdpA (A:)
gsshhhhhhsqdpmsyystsvaklieelsklpgigpktaqrlaffiinmpldevrslsqa
iieakeklryckicfnitdkevcdicsdenrdhsticvvshpmdvvamekvkeykgvyhv
lhgvispiegvgpedirikellervrdgsvkevilatnpdiegeatamyiakllkpfgvk
vtriahgipvggdleytdvvtlskalegrrev

    Sequence, based on observed residues (ATOM records): (download) 
    >3vdpA (A:)
yystsvaklieelsklpgigpktaqrlaffiinmpldevrslsqaiieakeklryckicf
nitdkevcdicsdenrdhsticvvshpmdvvamekvkeykgvyhvlhgvispiegvgped
irikellervrdgsvkevilatnpdiegeatamyiakllkpfgvkvtriahgipvggdle
ytdvvtlskalegrrev

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3vdpB (B:)
gsshhhhhhsqdpmsyystsvaklieelsklpgigpktaqrlaffiinmpldevrslsqa
iieakeklryckicfnitdkevcdicsdenrdhsticvvshpmdvvamekvkeykgvyhv
lhgvispiegvgpedirikellervrdgsvkevilatnpdiegeatamyiakllkpfgvk
vtriahgipvggdleytdvvtlskalegrrev

    Sequence, based on observed residues (ATOM records): (download) 
    >3vdpB (B:)
stsvaklieelsklpgigpktaqrlaffiinmpldevrslsqaiieakeklryckicfni
tdkevcdicsdenrdhsticvvshpmdvvamekvkeykgvyhvlhgvispiegvgpedir
ikellervrdgsvkevilatnpdiegeatamyiakllkpfgvkvtriahgipvggdleyt
dvvtlskalegrrev

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3vdpC (C:)
gsshhhhhhsqdpmsyystsvaklieelsklpgigpktaqrlaffiinmpldevrslsqa
iieakeklryckicfnitdkevcdicsdenrdhsticvvshpmdvvamekvkeykgvyhv
lhgvispiegvgpedirikellervrdgsvkevilatnpdiegeatamyiakllkpfgvk
vtriahgipvggdleytdvvtlskalegrrev

    Sequence, based on observed residues (ATOM records): (download) 
    >3vdpC (C:)
yystsvaklieelsklpgigpktaqrlaffiinmpldevrslsqaiieakeklryckicf
nitdkevcdicsdenrdhsticvvshpmdvvamekvkeykgvyhvlhgvispiegvgped
irikellervrdgsvkevilatnpdiegeatamyiakllkpfgvkvtriahgipvggdle
ytdvvtlskalegrrev

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3vdpD (D:)
gsshhhhhhsqdpmsyystsvaklieelsklpgigpktaqrlaffiinmpldevrslsqa
iieakeklryckicfnitdkevcdicsdenrdhsticvvshpmdvvamekvkeykgvyhv
lhgvispiegvgpedirikellervrdgsvkevilatnpdiegeatamyiakllkpfgvk
vtriahgipvggdleytdvvtlskalegrrev

    Sequence, based on observed residues (ATOM records): (download) 
    >3vdpD (D:)
msyystsvaklieelsklpgigpktaqrlaffiinmpldevrslsqaiieakeklrycki
cfnitdkevcdicsdenrdhsticvvshpmdvvamekvkeykgvyhvlhgvispiegvgp
edirikellervrdgsvkevilatnpdiegeatamyiakllkpfgvkvtriahgipvggd
leytdvvtlskalegrrev