PDB entry 3vdi

View 3vdi on RCSB PDB site
Description: Structure of the FMO protein from Pelodictyon phaeum
Class: photosynthesis
Keywords: alpha/beta protein, energy transfer, PHOTOSYNTHESIS
Deposited on 2012-01-05, released 2012-01-25
The last revision prior to the SCOPe 2.01 freeze date was dated 2012-01-25, with a file datestamp of 2012-01-20.
Experiment type: XRAY
Resolution: 1.99 Å
R-factor: 0.164
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Bacteriochlorophyll a protein
    Species: Pelodictyon phaeum [TaxId:34091]
    Database cross-references and differences (RAF-indexed):
    • PDB 3VDI (Start-366)
    Domains in SCOPe 2.01: d3vdia_
  • Heterogens: BCL, PG4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3vdiA (A:)
malfgtkdtttahsdyeiileggssswgqikgrakvnvpaalpllpadcnikieakplda
qkgvvrftsqiesivdstknklvvevdianetkdrriavgegevsvgdfshkfsfegsvv
nmyyyrsdavrrnvpnpvymqgrqfhdimmkvpldnkdlietwegfqqsisgggvnfgdw
irefwfigpaytaineggqrispiqvnnfgvesgekgpvgvsrwkfshagsgivdsisrw
aelfpveqlnkpasieggfrsdsqgievkvdgnlpgvsrdaggglrrilnhpliplvhhg
mvgkfndftvdtqlkvvlpkgykiryaapqfrsqnleeyrwsggayarwvehvckggtgq
fevlyaq

    Sequence, based on observed residues (ATOM records): (download) 
    >3vdiA (A:)
tttahsdyeiileggssswgqikgrakvnvpaalpllpadcnikieakpldaqkgvvrft
sqiesivdstknklvvevdianetkdrriavgegevsvgdfshkfsfegsvvnmyyyrsd
avrrnvpnpvymqgrqfhdimmkvpldnkdlietwegfqqsisgggvnfgdwirefwfig
paytaineggqrispiqvnnfgvesgpvgvsrwkfshagsgivdsisrwaelfpveqlnk
pasieggfrsdsqgievkvdgnlpgvsrdaggglrrilnhpliplvhhgmvgkfndftvd
tqlkvvlpkgykiryaapqfrsqnleeyrwsggayarwvehvckggtgqfevlyaq