PDB entry 3vbh
View 3vbh on RCSB PDB site
Description: Crystal structure of formaldehyde treated human enterovirus 71 (space group R32)
Class: virus
Keywords: virus, hand-foot-and-mouth disease, enterovirus uncoating, pocket factor, adaptor-sensor, icosahedral virus
Deposited on
2012-01-02, released
2012-02-29
The last revision prior to the SCOPe 2.06 freeze date was dated
2012-05-02, with a file datestamp of
2012-04-27.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.217
AEROSPACI score: 0.34
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Genome Polyprotein, capsid protein VP1
Species: Human enterovirus 71 [TaxId:39054]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3vbha_ - Chain 'B':
Compound: Genome Polyprotein, capsid protein VP2
Species: Human enterovirus 71 [TaxId:39054]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3vbhb_ - Chain 'C':
Compound: Genome Polyprotein, vapsid protein VP3
Species: Human enterovirus 71 [TaxId:39054]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3vbhc_ - Chain 'D':
Compound: Genome Polyprotein, capsid protein VP4
Species: Human enterovirus 71 [TaxId:39054]
Database cross-references and differences (RAF-indexed):
- Heterogens: SPH, K, NA, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>3vbhA (A:)
gdrvadviessigdsvsralthalpaptgqntqvsshrldtgkvpalqaaeigassnasd
esmietrcvlnshstaettldsffsraglvgeidlplkgttnpngyanwdiditgyaqmr
rkvelftymrfdaeftfvactptgevvpqllqymfvppgapkpdsreslawqtatnpsvf
vklsdppaqvsvpfmspasayqwfydgyptfgehkqekdleygampnnmmgtfsvrtvgt
skskyplvvriymrmkhvrawiprpmrnqnylfkanpnyagnsikptgasrtaittl
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>3vbhB (B:)
sdrvaqltignstittqeaaniivgygewpsycsdsdatavdkptrpdvsvnrfytldtk
lweksskgwywkfpdvltetgvfgqnaqfhylyrsgfcihvqcnaskfhqgallvavlpe
yvigtvaggtgtedthppykqtqpgadgfelqhpyvldagipisqltvcphqwinlrtnn
catiivpyinalpfdsalnhcnfgllvvpispldydqgatpvipititlapmcsefaglr
qavtq
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>3vbhC (C:)
gfptelkpgtnqflttddgvsapilpnfhptpcihipgevrnllelcqvetilevnnvpt
natslmerlrfpvsaqagkgelcavfradpgrngpwqstllgqlcgyytqwsgslevtfm
ftgsfmatgkmliaytppggplpkdratamlgthviwdfglqssvtlvipwisnthyrah
ardgvfdyyttglvsiwyqtnyvvpigapntayiialaaaqknftmklckdasdilqtgt
iq
- Chain 'D':
No sequence available.