PDB entry 3v61

View 3v61 on RCSB PDB site
Description: Structure of S. cerevisiae PCNA conjugated to SUMO on lysine 164
Class: protein binding/DNA binding protein
Keywords: UBIQUITIN-LIKE PROTEIN PCNA, POST-TRANSLATIONAL MODIFICATION, DNA REPLICATION, DNA DAMAGE RESPONSE, SRS2, NEM MODIFICATION ON PCNA CYS22 AND CYS81, NUCLEAR, PROTEIN BINDING-DNA BINDING PROTEIN complex
Deposited on 2011-12-18, released 2012-02-29
The last revision prior to the SCOPe 2.04 freeze date was dated 2013-09-18, with a file datestamp of 2013-09-13.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.216
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ubiquitin-like protein SMT3
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: D9719.15, SMT3, YDR510W
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d3v61a_
  • Chain 'B':
    Compound: Proliferating Cell Nuclear Antigen
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: POL30, YBR0811, YBR088C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P15873 (0-End)
      • engineered mutation (126)
    Domains in SCOPe 2.04: d3v61b1, d3v61b2
  • Heterogens: BA, NEQ, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3v61A (A:)
gshmrpethinlkvsdgsseiffkikkttplrrlmeafakrqgkemdslrflydgiriqa
dqtpedldmedndiieahreqigg

    Sequence, based on observed residues (ATOM records): (download) 
    >3v61A (A:)
thinlkvsdgsseiffkikkttplrrlmeafakrqgkemdslrflydgiriqadqtpedl
dmedndiieahreqigg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3v61B (B:)
mleakfeeaslfkriidgfkdcvqlvnfqckedgiiaqavddsrvllvsleigveafqey
rcdhpvtlgmdltslskilrcgnntdtltliadntpdsiillfedtkkdriaeyslklmd
idadflgieelqydstlslpssefskivrdlsqlsdsinimitketikfvadgdigsgsv
iikpfvdmehpetsiklemdqpvdltfgakylldiikgsslsdrvgirlsseapalfqfd
lksgflqfflapkfndee

    Sequence, based on observed residues (ATOM records): (download) 
    >3v61B (B:)
mleakfeeaslfkriidgfkdcvqlvnfqckedgiiaqavddsrvllvsleigveafqey
rcdhpvtlgmdltslskilrcgnntdtltliadntpdsiillfedtkkdriaeyslklmd
idadflgieelqydstlslpssefskivrdlsqlsdsinimitketikfvadgdigsgsv
iikpfvdmehpetsiklemdqpvdltfgakylldiikgsslsdrvgirlsseapalfqfd
lksgflqfflapkf