PDB entry 3v3d

View 3v3d on RCSB PDB site
Description: Crystal Structure of an eYFP single mutant
Class: fluorescent protein
Keywords: Second Harmonic Imaging, FLUORESCENT PROTEIN
Deposited on 2011-12-13, released 2012-12-26
The last revision prior to the SCOPe 2.06 freeze date was dated 2013-03-27, with a file datestamp of 2013-03-22.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.187
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: yellow fluorescent protein
    Species: Aequorea victoria [TaxId:6100]
    Gene: GFP
    Database cross-references and differences (RAF-indexed):
    • Uniprot P42212 (22-End)
      • chromophore (86)
      • engineered mutation (88)
      • engineered mutation (92)
      • engineered mutation (223)
      • engineered mutation (251)
    Domains in SCOPe 2.06: d3v3da_
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3v3dA (A:)
mgsshhhhhhssglvprgshmvskgeelftgvvpilveldgdvnghkfsvsgegegdaty
gkltlkficttgklpvpwptlvttfgyglqcfarypdhmkqhdffksampegyvqertif
fkddgnyktraevkfegdtlvnrielkgidfkedgnilghkleynynshnvyimadkqkn
gikvnfkirhniedgsvqladhyqqntpigdgpvllpdnhylsfqsalskdpnekrdhmv
llefvtaagitlgmdelyk

    Sequence, based on observed residues (ATOM records): (download) 
    >3v3dA (A:)
skgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlv
ttfgyglqcfarypdhmkqhdffksampegyvqertiffkddgnyktraevkfegdtlvn
rielkgidfkedgnilghkleynynshnvyimadkqkngikvnfkirhniedgsvqladh
yqqntpigdgpvllpdnhylsfqsalskdpnekrdhmvllefvtaagitlgm