PDB entry 3ukg

View 3ukg on RCSB PDB site
Description: Crystal structure of Rap1/DNA complex
Class: DNA binding protein/DNA
Keywords: double Myb, transcription regulation, telomeres length regulation, telomeres protection, nucleus, DNA BINDING PROTEIN-DNA complex
Deposited on 2011-11-09, released 2011-12-07
The last revision prior to the SCOPe 2.07 freeze date was dated 2012-05-09, with a file datestamp of 2012-05-04.
Experiment type: XRAY
Resolution: 2.95 Å
R-factor: 0.198
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA-binding protein RAP1
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: RAP1, GRF1, TUF1, YNL216W, N1310
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3ukga1, d3ukga2
  • Chain 'C':
    Compound: telomeric DNA
  • Chain 'D':
    Compound: telomeric DNA
  • Heterogens: CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3ukgA (A:)
kasftdeedefildvvrknptrrtthtlydeishyvpnhtgnsirhrfrvylskrleyvy
evdkfgklvrdddgnliktkvlppsikrkfsadedytlaiavkkqfyrdlfqidpdtgrs
litdedtptaiarrnmtmdpnhvpgsepnfaayrtqsrrgpiareffkhfaeehaahten
awrdrfrkfllaygiddyisyyeaekaqnrepepmknltnrpkrpgvptpgnynsaakra
rn

    Sequence, based on observed residues (ATOM records): (download) 
    >3ukgA (A:)
kasftdeedefildvvrknptrrtthtlydeishyvpnhtgnsirhrfrvylskrleyvy
evdkfgklvrdddgnliktkvlppsikrkfsadedytlaiavkkqfyrdlfqidpdtgrs
pnhvpgsepnfaayrtqsrrgpiareffkhfaeehaahtenawrdrfrkfllaygiddyi
syyeaekaqnrepepmknltnrpkrpgvptpgnynsaakrarn

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.