PDB entry 3ubm

View 3ubm on RCSB PDB site
Description: Formyl-CoA:oxalate CoA-transferase from Acetobacter aceti
Class: transferase
Keywords: transferase
Deposited on 2011-10-24, released 2012-03-21
The last revision prior to the SCOPe 2.08 freeze date was dated 2012-04-18, with a file datestamp of 2012-04-13.
Experiment type: XRAY
Resolution: 1.99 Å
R-factor: 0.198
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Formyl-CoA:oxalate CoA-transferase
    Species: Acetobacter aceti [TaxId:435]
    Gene: uctB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3ubma_
  • Chain 'B':
    Compound: Formyl-CoA:oxalate CoA-transferase
    Species: Acetobacter aceti [TaxId:435]
    Gene: uctB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3ubmb_
  • Chain 'C':
    Compound: Formyl-CoA:oxalate CoA-transferase
    Species: Acetobacter aceti [TaxId:435]
    Gene: uctB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3ubmc_
  • Chain 'D':
    Compound: Formyl-CoA:oxalate CoA-transferase
    Species: Acetobacter aceti [TaxId:435]
    Gene: uctB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3ubmd_
  • Heterogens: COA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3ubmA (A:)
mgsshhhhhhssglvprgshmgttsenskpldgikvidfggvqsvpsaaqllawygadvi
kiervgvgditrnqlrdipdadalyftmlncnkrsvelntktpegkavfekcikwadill
enfrpgamermgftweylqqlnprliygtvkgfgenspwagvsayenvaqcaggatsttg
ywngaplvdgqapgnnngplvsaaalgdsntgnhlligvlaalfgrertgkgqkisvsmq
davlnlcrvklrdqqrlervgyleeypqypngkfgdtvprggnaggggqpgwilkckgwe
tddnayiyctvqeqdwgptceaigkpewatdpkyntakarethmfeifaaiekaiadktk
yeavahlakyrvpcspvlsmkeiaeapdlresgtivevqqpkrgtfltinpikfsgftpe
ikaapllgqhtdevlaelgysaeeikslrdkkitca

    Sequence, based on observed residues (ATOM records): (download) 
    >3ubmA (A:)
kpldgikvidfggvqsvpsaaqllawygadvikiervgvgditrnqlrdipdadalyftm
lncnkrsvelntktpegkavfekcikwadillenfrpgamermgftweylqqlnprliyg
tvkgfgenspwagvsayenvaqcaggatsttgywngaplvdgqapgnnngplvsaaalgd
sntgnhlligvlaalfgrertgkgqkisvsmqdavlnlcrvklrdqqrlervgyleeypq
ypngkfgdtvprggnaggggqpgwilkckgwetddnayiyctvqeqdwgptceaigkpew
atdpkyntakarethmfeifaaiekaiadktkyeavahlakyrvpcspvlsmkeiaeapd
lresgtivevqqpkrgtfltinpikfsgftpeikaapllgqhtdevlaelgysaeeiksl
rdkkitca

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3ubmB (B:)
mgsshhhhhhssglvprgshmgttsenskpldgikvidfggvqsvpsaaqllawygadvi
kiervgvgditrnqlrdipdadalyftmlncnkrsvelntktpegkavfekcikwadill
enfrpgamermgftweylqqlnprliygtvkgfgenspwagvsayenvaqcaggatsttg
ywngaplvdgqapgnnngplvsaaalgdsntgnhlligvlaalfgrertgkgqkisvsmq
davlnlcrvklrdqqrlervgyleeypqypngkfgdtvprggnaggggqpgwilkckgwe
tddnayiyctvqeqdwgptceaigkpewatdpkyntakarethmfeifaaiekaiadktk
yeavahlakyrvpcspvlsmkeiaeapdlresgtivevqqpkrgtfltinpikfsgftpe
ikaapllgqhtdevlaelgysaeeikslrdkkitca

    Sequence, based on observed residues (ATOM records): (download) 
    >3ubmB (B:)
nskpldgikvidfggvqsvpsaaqllawygadvikiervgvgditrnqlrdipdadalyf
tmlncnkrsvelntktpegkavfekcikwadillenfrpgamermgftweylqqlnprli
ygtvkgfgenspwagvsayenvaqcaggatsttgywngaplvdgqapgnnngplvsaaal
gdsntgnhlligvlaalfgrertgkgqkisvsmqdavlnlcrvklrdqqrlervgyleey
pqypngkfgdtvprggnaggggqpgwilkckgwetddnayiyctvqeqdwgptceaigkp
ewatdpkyntakarethmfeifaaiekaiadktkyeavahlakyrvpcspvlsmkeiaea
pdlresgtivevqqpkrgtfltinpikfsgftpeikaapllgqhtdevlaelgysaeeik
slrdkkitca

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3ubmC (C:)
mgsshhhhhhssglvprgshmgttsenskpldgikvidfggvqsvpsaaqllawygadvi
kiervgvgditrnqlrdipdadalyftmlncnkrsvelntktpegkavfekcikwadill
enfrpgamermgftweylqqlnprliygtvkgfgenspwagvsayenvaqcaggatsttg
ywngaplvdgqapgnnngplvsaaalgdsntgnhlligvlaalfgrertgkgqkisvsmq
davlnlcrvklrdqqrlervgyleeypqypngkfgdtvprggnaggggqpgwilkckgwe
tddnayiyctvqeqdwgptceaigkpewatdpkyntakarethmfeifaaiekaiadktk
yeavahlakyrvpcspvlsmkeiaeapdlresgtivevqqpkrgtfltinpikfsgftpe
ikaapllgqhtdevlaelgysaeeikslrdkkitca

    Sequence, based on observed residues (ATOM records): (download) 
    >3ubmC (C:)
skpldgikvidfggvqsvpsaaqllawygadvikiervgvgditrnqlrdipdadalyft
mlncnkrsvelntktpegkavfekcikwadillenfrpgamermgftweylqqlnprliy
gtvkgfgenspwagvsayenvaqcaggatsttgywngaplvdgqapgnnngplvsaaalg
dsntgnhlligvlaalfgrertgkgqkisvsmqdavlnlcrvklrdqqrlervgyleeyp
qypngkfgdtvprggnaggggqpgwilkckgwetddnayiyctvqeqdwgptceaigkpe
watdpkyntakarethmfeifaaiekaiadktkyeavahlakyrvpcspvlsmkeiaeap
dlresgtivevqqpkrgtfltinpikfsgftpeikaapllgqhtdevlaelgysaeeiks
lrdkkitca

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3ubmD (D:)
mgsshhhhhhssglvprgshmgttsenskpldgikvidfggvqsvpsaaqllawygadvi
kiervgvgditrnqlrdipdadalyftmlncnkrsvelntktpegkavfekcikwadill
enfrpgamermgftweylqqlnprliygtvkgfgenspwagvsayenvaqcaggatsttg
ywngaplvdgqapgnnngplvsaaalgdsntgnhlligvlaalfgrertgkgqkisvsmq
davlnlcrvklrdqqrlervgyleeypqypngkfgdtvprggnaggggqpgwilkckgwe
tddnayiyctvqeqdwgptceaigkpewatdpkyntakarethmfeifaaiekaiadktk
yeavahlakyrvpcspvlsmkeiaeapdlresgtivevqqpkrgtfltinpikfsgftpe
ikaapllgqhtdevlaelgysaeeikslrdkkitca

    Sequence, based on observed residues (ATOM records): (download) 
    >3ubmD (D:)
nskpldgikvidfggvqsvpsaaqllawygadvikiervgvgditrnqlrdipdadalyf
tmlncnkrsvelntktpegkavfekcikwadillenfrpgamermgftweylqqlnprli
ygtvkgfgenspwagvsayenvaqcaggatsttgywngaplvdgqapgnnngplvsaaal
gdsntgnhlligvlaalfgrertgkgqkisvsmqdavlnlcrvklrdqqrlervgyleey
pqypngkfgdtvprggnaggggqpgwilkckgwetddnayiyctvqeqdwgptceaigkp
ewatdpkyntakarethmfeifaaiekaiadktkyeavahlakyrvpcspvlsmkeiaea
pdlresgtivevqqpkrgtfltinpikfsgftpeikaapllgqhtdevlaelgysaeeik
slrdkkitca