PDB entry 3u30
View 3u30 on RCSB PDB site
Description: Crystal structure of a linear-specific Ubiquitin fab bound to linear ubiquitin
Class: immune system
Keywords: immune system
Deposited on
2011-10-04, released
2012-01-18
The last revision prior to the SCOPe 2.03 freeze date was dated
2013-01-09, with a file datestamp of
2013-01-04.
Experiment type: XRAY
Resolution: 2.43 Å
R-factor: 0.231
AEROSPACI score: 0.32
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: linear di-ubiquitin
Species: Homo sapiens [TaxId:9606]
Gene: UBC
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Light chain Fab
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3u30b1, d3u30b2 - Chain 'C':
Compound: Heavy chain Fab
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: linear di-ubiquitin
Species: Homo sapiens [TaxId:9606]
Gene: UBC
Database cross-references and differences (RAF-indexed):
- Chain 'E':
Compound: Light chain Fab
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3u30e1, d3u30e2 - Chain 'F':
Compound: Heavy chain Fab
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3u30B (B:)
diqmtqspsslsasvgdrvtitcrasqdvstavawyqqkpgkapklliysakflysgvps
rfsgsgsgtdftltisslqpedfatyycqqsyttpptfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec
Sequence, based on observed residues (ATOM records): (download)
>3u30B (B:)
diqmtqspsslsasvgdrvtitcrasqdvstavawyqqkpgkapklliysakflysgvps
rfsgsgsgtdftltisslqpedfatyycqqsyttpptfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnr
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.
- Chain 'E':
Sequence, based on SEQRES records: (download)
>3u30E (E:)
diqmtqspsslsasvgdrvtitcrasqdvstavawyqqkpgkapklliysakflysgvps
rfsgsgsgtdftltisslqpedfatyycqqsyttpptfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec
Sequence, based on observed residues (ATOM records): (download)
>3u30E (E:)
diqmtqspsslsasvgdrvtitcrasqdvstavawyqqkpgkapklliysakflysgvps
rfsgsgsgtdftltisslqpedfatyycqqsyttpptfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnr
- Chain 'F':
No sequence available.