PDB entry 3tnn
View 3tnn on RCSB PDB site
Description: Crystal structure of N5-i5 Fab, an ADCC mediating and non-neutralizing CD4i anti-HIV- 1 antibody.
Class: immune system
Keywords: ANTI-HIV-1 ENV ANTIBODY n5-i5, CD4i antibody, ADCC, HIV-1 Env, IMMUNE SYSTEM
Deposited on
2011-09-01, released
2012-09-26
The last revision prior to the SCOPe 2.05 freeze date was dated
2012-09-26, with a file datestamp of
2012-09-21.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.2
AEROSPACI score: 0.44
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Fab heavy chain of ADCC and non-neutralizing anti-HIV-1 antibody N5-i5
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Fab light chain of ADCC and non-neutralizing anti-HIV-1 antibody N5-i5
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3tnnb1, d3tnnb2 - Chain 'C':
Compound: Fab heavy chain of ADCC and non-neutralizing anti-HIV-1 antibody N5-i5
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: Fab light chain of ADCC and non-neutralizing anti-HIV-1 antibody N5-i5
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3tnnd1, d3tnnd2 - Chain 'E':
Compound: Fab heavy chain of ADCC and non-neutralizing anti-HIV-1 antibody N5-i5
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'F':
Compound: Fab light chain of ADCC and non-neutralizing anti-HIV-1 antibody N5-i5
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3tnnf1, d3tnnf2 - Chain 'H':
Compound: Fab heavy chain of ADCC and non-neutralizing anti-HIV-1 antibody N5-i5
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: Fab light chain of ADCC and non-neutralizing anti-HIV-1 antibody N5-i5
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3tnnl1, d3tnnl2 - Heterogens: SO4, GOL, CL, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3tnnB (B:)
qsaltqpasvsgspgqsitisctgtssdvgsynfvswyqqhpgkapklmiyevserpsgi
snrfsgsksgntasltisglqaedeadyycssyagsttfrvfgggtkltvrgqpkaapsv
tlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaas
sylsltpeqwkshrsyscqvthegstvektvaptecs
Sequence, based on observed residues (ATOM records): (download)
>3tnnB (B:)
altqpasvsgspgqsitisctgtssdvgsynfvswyqqhpgkapklmiyevserpsgisn
rfsgsksgntasltisglqaedeadyycssyagsttfrvfgggtkltvrgqpkaapsvtl
fppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassy
lsltpeqwkshrsyscqvthegstvektvapt
- Chain 'C':
No sequence available.
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3tnnD (D:)
qsaltqpasvsgspgqsitisctgtssdvgsynfvswyqqhpgkapklmiyevserpsgi
snrfsgsksgntasltisglqaedeadyycssyagsttfrvfgggtkltvrgqpkaapsv
tlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaas
sylsltpeqwkshrsyscqvthegstvektvaptecs
Sequence, based on observed residues (ATOM records): (download)
>3tnnD (D:)
altqpasvsgspgqsitisctgtssdvgsynfvswyqqhpgkapklmiyevserpsgisn
rfsgsksgntasltisglqaedeadyycssyagsttfrvfgggtkltvrgqpkaapsvtl
fppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassy
lsltpeqwkshrsyscqvthegstvektvapt
- Chain 'E':
No sequence available.
- Chain 'F':
Sequence, based on SEQRES records: (download)
>3tnnF (F:)
qsaltqpasvsgspgqsitisctgtssdvgsynfvswyqqhpgkapklmiyevserpsgi
snrfsgsksgntasltisglqaedeadyycssyagsttfrvfgggtkltvrgqpkaapsv
tlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaas
sylsltpeqwkshrsyscqvthegstvektvaptecs
Sequence, based on observed residues (ATOM records): (download)
>3tnnF (F:)
altqpasvsgspgqsitisctgtssdvgsynfvswyqqhpgkapklmiyevserpsgisn
rfsgsksgntasltisglqaedeadyycssyagsttfrvfgggtkltvrgqpkaapsvtl
fppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassy
lsltpeqwkshrsyscqvthegstvektvapt
- Chain 'H':
No sequence available.
- Chain 'L':
Sequence, based on SEQRES records: (download)
>3tnnL (L:)
qsaltqpasvsgspgqsitisctgtssdvgsynfvswyqqhpgkapklmiyevserpsgi
snrfsgsksgntasltisglqaedeadyycssyagsttfrvfgggtkltvrgqpkaapsv
tlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaas
sylsltpeqwkshrsyscqvthegstvektvaptecs
Sequence, based on observed residues (ATOM records): (download)
>3tnnL (L:)
altqpasvsgspgqsitisctgtssdvgsynfvswyqqhpgkapklmiyevserpsgisn
rfsgsksgntasltisglqaedeadyycssyagsttfrvfgggtkltvrgqpkaapsvtl
fppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassy
lsltpeqwkshrsyscqvthegstvektvapt