PDB entry 3t5i
View 3t5i on RCSB PDB site
Description: Structure of Fully modified farnesylated Rheb Peptide in complex with PDE6D
Class: lipid binding protein
Keywords: Immunoglobulin-like beta sandwitch fold, Rheb, Farnesyl, prenyl, SIGNALING PROTEIN, LIPID BINDING PROTEIN
Deposited on
2011-07-27, released
2011-11-02
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-11-08, with a file datestamp of
2017-11-03.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
Species: Homo sapiens [TaxId:9606]
Gene: PDE6D, PDED
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3t5ia_ - Chain 'B':
Compound: Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
Species: Homo sapiens [TaxId:9606]
Gene: PDE6D, PDED
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3t5ib_ - Chain 'C':
Compound: Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
Species: Homo sapiens [TaxId:9606]
Gene: PDE6D, PDED
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3t5ic_ - Chain 'D':
Compound: Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
Species: Homo sapiens [TaxId:9606]
Gene: PDE6D, PDED
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3t5id_ - Chain 'Q':
Compound: C-terminal Farnesylated Rheb peptide CSQQGKSS(CMT)
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Chain 'R':
Compound: C-terminal Farnesylated Rheb peptide CSQQGKSS(CMT)
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Heterogens: FAR, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3t5iA (A:)
gsmsakderareilrgfklnwmnlrdaetgkilwqgtedlsvpgvehearvpkkilkcka
vsrelnfssteqmekfrleqkvyfkgqcleewffefgfvipnstntwqslieaapesqmm
pasvltgnviietkffdddllvstsrvrlfyv
Sequence, based on observed residues (ATOM records): (download)
>3t5iA (A:)
sakderareilrgfklnwmnlrdaetgkilwqgtedlsvpgvehearvpkkilkckavsr
elnfssteqmekfrleqkvyfkgqcleewffefgfvipnstntwqslieaapesqmmpas
vltgnviietkffdddllvstsrvrlfyv
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3t5iB (B:)
gsmsakderareilrgfklnwmnlrdaetgkilwqgtedlsvpgvehearvpkkilkcka
vsrelnfssteqmekfrleqkvyfkgqcleewffefgfvipnstntwqslieaapesqmm
pasvltgnviietkffdddllvstsrvrlfyv
Sequence, based on observed residues (ATOM records): (download)
>3t5iB (B:)
kderareilrgfklnwmnlrdaetgkilwqgtedlsvpgvehearvpkkilkckavsrel
nfssteqmekfrleqkvyfkgqcleewffefgfvipnstntwqslieaampasvltgnvi
ietkffdddllvstsrvrlfyv
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3t5iC (C:)
gsmsakderareilrgfklnwmnlrdaetgkilwqgtedlsvpgvehearvpkkilkcka
vsrelnfssteqmekfrleqkvyfkgqcleewffefgfvipnstntwqslieaapesqmm
pasvltgnviietkffdddllvstsrvrlfyv
Sequence, based on observed residues (ATOM records): (download)
>3t5iC (C:)
sakderareilrgfklnwmnlrdaetgkilwqgtedlsvpgvehearvpkkilkckavsr
elnfssteqmekfrleqkvyfkgqcleewffefgfvipnstntwqslieaapesqmmpas
vltgnviietkffdddllvstsrvrlfyv
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3t5iD (D:)
gsmsakderareilrgfklnwmnlrdaetgkilwqgtedlsvpgvehearvpkkilkcka
vsrelnfssteqmekfrleqkvyfkgqcleewffefgfvipnstntwqslieaapesqmm
pasvltgnviietkffdddllvstsrvrlfyv
Sequence, based on observed residues (ATOM records): (download)
>3t5iD (D:)
sakderareilrgfklnwmnlrdaetgkilwqgtedlsvpgvehearvpkkilkckavsr
elnfssteqmekfrleqkvyfkgqcleewffefgfvipnstntwqslieaapesqmmpas
vltgnviietkffdddllvstsrvrlfyv
- Chain 'Q':
No sequence available.
- Chain 'R':
No sequence available.