PDB entry 3szh
View 3szh on RCSB PDB site
Description: Crystal structure of apo shwanavidin (P1 form)
Class: Biotin-binding protein
Keywords: high affinity systems, avidin, streptavidin, biotin, shwanavidin, Biotin-binding protein
Deposited on
2011-07-19, released
2012-04-11
The last revision prior to the SCOPe 2.07 freeze date was dated
2012-06-13, with a file datestamp of
2012-06-08.
Experiment type: XRAY
Resolution: 1.07 Å
R-factor: 0.16
AEROSPACI score: 0.92
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Avidin/streptavidin
Species: Shewanella denitrificans [TaxId:318161]
Gene: Sden_0912
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3szha_ - Chain 'B':
Compound: Avidin/streptavidin
Species: Shewanella denitrificans [TaxId:318161]
Gene: Sden_0912
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3szhb_ - Chain 'C':
Compound: Avidin/streptavidin
Species: Shewanella denitrificans [TaxId:318161]
Gene: Sden_0912
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3szhc1, d3szhc2 - Chain 'D':
Compound: Avidin/streptavidin
Species: Shewanella denitrificans [TaxId:318161]
Gene: Sden_0912
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3szhd_ - Chain 'E':
Compound: Avidin/streptavidin
Species: Shewanella denitrificans [TaxId:318161]
Gene: Sden_0912
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3szhe_ - Chain 'F':
Compound: Avidin/streptavidin
Species: Shewanella denitrificans [TaxId:318161]
Gene: Sden_0912
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3szhf_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3szhA (A:)
mamaqeltamsawvnqdgstlyinsinaqgeltgsyinraagfacqnspypvngwvfgta
isfstkwlnsvescnsitswsgfyintggqgkistlwqlvvngssspsqilkgqdvfsqt
sa
Sequence, based on observed residues (ATOM records): (download)
>3szhA (A:)
qeltamsawvnqdgstlyinsinaqgeltgsyinraagfacqnspypvngwvfgtaisfs
tkwlnsvescnsitswsgfyingqgkistlwqlvvngssspsqilkgqdvfsqts
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3szhB (B:)
mamaqeltamsawvnqdgstlyinsinaqgeltgsyinraagfacqnspypvngwvfgta
isfstkwlnsvescnsitswsgfyintggqgkistlwqlvvngssspsqilkgqdvfsqt
sa
Sequence, based on observed residues (ATOM records): (download)
>3szhB (B:)
maqeltamsawvnqdgstlyinsinaqgeltgsyinraagfacqnspypvngwvfgtais
fstkwlnsvescnsitswsgfyingqgkistlwqlvvngssspsqilkgqdvfsqt
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3szhC (C:)
mamaqeltamsawvnqdgstlyinsinaqgeltgsyinraagfacqnspypvngwvfgta
isfstkwlnsvescnsitswsgfyintggqgkistlwqlvvngssspsqilkgqdvfsqt
sa
Sequence, based on observed residues (ATOM records): (download)
>3szhC (C:)
amaqeltamsawvnqdgstlyinsinaqgeltgsyinraafacqnspypvngwvfgtais
fstkwlnsvescnsitswsgfyintgqgkistlwqlvvngssspsqilkgqdvfsqt
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3szhD (D:)
mamaqeltamsawvnqdgstlyinsinaqgeltgsyinraagfacqnspypvngwvfgta
isfstkwlnsvescnsitswsgfyintggqgkistlwqlvvngssspsqilkgqdvfsqt
sa
Sequence, based on observed residues (ATOM records): (download)
>3szhD (D:)
maqeltamsawvnqdgstlyinsinaqgeltgsyinraafacqnspypvngwvfgtaisf
stkwlnsvescnsitswsgfyintgqgkistlwqlvvngssspsqilkgqdvfsqt
- Chain 'E':
Sequence, based on SEQRES records: (download)
>3szhE (E:)
mamaqeltamsawvnqdgstlyinsinaqgeltgsyinraagfacqnspypvngwvfgta
isfstkwlnsvescnsitswsgfyintggqgkistlwqlvvngssspsqilkgqdvfsqt
sa
Sequence, based on observed residues (ATOM records): (download)
>3szhE (E:)
aqeltamsawvnqdgstlyinsinaqgeltgsyinraafacqnspypvngwvfgtaisfs
tkwlnsvescnsitswsgfyintggqgkistlwqlvvngssspsqilkgqdvfsqt
- Chain 'F':
Sequence, based on SEQRES records: (download)
>3szhF (F:)
mamaqeltamsawvnqdgstlyinsinaqgeltgsyinraagfacqnspypvngwvfgta
isfstkwlnsvescnsitswsgfyintggqgkistlwqlvvngssspsqilkgqdvfsqt
sa
Sequence, based on observed residues (ATOM records): (download)
>3szhF (F:)
aqeltamsawvnqdgstlyinsinaqgeltgsyinraagfacqnspypvngwvfgtaisf
stkwlnsvescnsitswsgfyintggqgkistlwqlvvngssspsqilkgqdvfsqt