PDB entry 3sv5
View 3sv5 on RCSB PDB site
Description: Engineered medium-affinity halide-binding protein derived from YFP: iodide complex
Class: halide binding protein
Keywords: beta barrel, luminescent protein, yellow fluorescent protein, imaging reagent, HALIDE BINDING PROTEIN
Deposited on
2011-07-12, released
2012-07-18
The last revision prior to the SCOPe 2.06 freeze date was dated
2013-10-23, with a file datestamp of
2013-10-18.
Experiment type: XRAY
Resolution: 1.53 Å
R-factor: 0.161
AEROSPACI score: 0.56
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Green fluorescent protein
Species: Aequorea victoria [TaxId:6100]
Gene: GFP
Database cross-references and differences (RAF-indexed):
- Uniprot P42212 (0-End)
- insertion (1)
- chromophore (66)
- engineered mutation (69)
- engineered mutation (72)
- engineered mutation (79)
- engineered mutation (163)
- engineered mutation (203)
Domains in SCOPe 2.06: d3sv5a_ - Heterogens: EDO, IOD, FMT, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3sv5A (A:)
mvskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwpt
lvttfgygvtcfarypdhmrqhdffksampegyvqertiffkddgnyktraevkfegdtl
vnrielkgidfkedgnilghkleynynshnvyimadkqkngikanfkirhniedgsvqla
dhyqqntpigdgpvllpdnhylsyqsalskdpnekrdhmvllefvtaagitlgmdelykg
gsndykddddkggshhhhhh
Sequence, based on observed residues (ATOM records): (download)
>3sv5A (A:)
mvskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwpt
lvttfgygvtcfarypdhmrqhdffksampegyvqertiffkddgnyktraevkfegdtl
vnrielkgidfkedgnilghkleynynshnvyimadkqkngikanfkirhniedgsvqla
dhyqqntpigdgpvllpdnhylsyqsalskdpnekrdhmvllefvtaagit