PDB entry 3sv5

View 3sv5 on RCSB PDB site
Description: Engineered medium-affinity halide-binding protein derived from YFP: iodide complex
Class: halide binding protein
Keywords: beta barrel, luminescent protein, yellow fluorescent protein, imaging reagent, HALIDE BINDING PROTEIN
Deposited on 2011-07-12, released 2012-07-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-08, with a file datestamp of 2017-11-03.
Experiment type: XRAY
Resolution: 1.53 Å
R-factor: N/A
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Green fluorescent protein
    Species: Aequorea victoria [TaxId:6100]
    Gene: GFP
    Database cross-references and differences (RAF-indexed):
    • Uniprot P42212 (0-End)
      • insertion (1)
      • chromophore (66)
      • engineered mutation (69)
      • engineered mutation (72)
      • engineered mutation (79)
      • engineered mutation (163)
      • engineered mutation (203)
    Domains in SCOPe 2.08: d3sv5a_
  • Heterogens: EDO, IOD, FMT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3sv5A (A:)
mvskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwpt
lvttfgygvtcfarypdhmrqhdffksampegyvqertiffkddgnyktraevkfegdtl
vnrielkgidfkedgnilghkleynynshnvyimadkqkngikanfkirhniedgsvqla
dhyqqntpigdgpvllpdnhylsyqsalskdpnekrdhmvllefvtaagitlgmdelykg
gsndykddddkggshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3sv5A (A:)
mvskgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwpt
lvttfgygvtcfarypdhmrqhdffksampegyvqertiffkddgnyktraevkfegdtl
vnrielkgidfkedgnilghkleynynshnvyimadkqkngikanfkirhniedgsvqla
dhyqqntpigdgpvllpdnhylsyqsalskdpnekrdhmvllefvtaagit