PDB entry 3stb
View 3stb on RCSB PDB site
Description: A complex of two editosome proteins and two nanobodies
Class: RNA binding protein/immune system
Keywords: RNA EDITING, Editosome, Nanobody, Single domain antibody, VHH, KREPA3, KREPA6, RNA BINDING PROTEIN-IMMUNE SYSTEM complex
Deposited on
2011-07-09, released
2011-11-02
The last revision prior to the SCOPe 2.06 freeze date was dated
2013-09-18, with a file datestamp of
2013-09-13.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.201
AEROSPACI score: 0.32
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: single domain antibody VHH
Species: Lama glama [TaxId:9844]
Gene: single domain antibody VHH
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3stba1, d3stba2 - Chain 'B':
Compound: single domain antibody VHH
Species: Lama glama [TaxId:9844]
Gene: single domain antibody VHH
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3stbb1, d3stbb2 - Chain 'C':
Compound: RNA-editing complex protein MP42
Species: Trypanosoma brucei [TaxId:5691]
Gene: KREPA3, Tb927.8.620
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: MP18 RNA editing complex protein
Species: Trypanosoma brucei [TaxId:5691]
Gene: KREPA6, Tb10.70.2090
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3stbA (A:)
qvqlqesggglvqaggslrlscaasgrtlssyamgwfrqapgkerefvaainrsgstfya
davkgrftisrdnakntvylqmnslkpedtaayycaadrfspvvpgpipvntvdswgqgt
qvtvsshhhhhh
Sequence, based on observed residues (ATOM records): (download)
>3stbA (A:)
vqlqesggglvqaggslrlscaasgrtlssyamgwfrqapgkerefvaainrsgstfyad
avkgrftisrdnakntvylqmnslkpedtaayycaadrfspvvpgpipvntvdswgqgtq
vtvss
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3stbB (B:)
qvqlqesggglvqaggslrlscaasgrtlssyamgwfrqapgkerefvaainrsgstfya
davkgrftisrdnakntvylqmnslkpedtaayycaadrfspvvpgpipvntvdswgqgt
qvtvsshhhhhh
Sequence, based on observed residues (ATOM records): (download)
>3stbB (B:)
qvqlqesggglvqaggslrlscaasgrtlssyamgwfrqapgkerefvaainrsgstfya
davkgrftisrdnakntvylqmnslkpedtaayycaadrfspvvpgpipvntvdswgqgt
qvtvss
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.