PDB entry 3sp9
View 3sp9 on RCSB PDB site
Description: Structural basis for iloprost as a dual PPARalpha/delta agonist
Class: transcription
Keywords: nuclear receptor LBD, nuclear receptor fold, ligand binding, gene transcription, drug binding, TRANSCRIPTION
Deposited on
2011-07-01, released
2011-07-20
The last revision prior to the SCOPe 2.05 freeze date was dated
2014-04-16, with a file datestamp of
2014-04-11.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.198
AEROSPACI score: 0.3
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Peroxisome proliferator-activated receptor delta
Species: Homo sapiens [TaxId:9606]
Gene: PPARD, NR1C2, PPARB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3sp9a_ - Chain 'B':
Compound: Peroxisome proliferator-activated receptor delta
Species: Homo sapiens [TaxId:9606]
Gene: PPARD, NR1C2, PPARB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3sp9b_ - Heterogens: IL2, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3sp9A (A:)
hhhhhhlvprgsadlkafskhiynaylknfnmtkkkarsiltgkashtapfvihdietlw
qaekglvwkqlvnglppykeisvhvfyrcqcttvetvreltefaksipsfsslflndqvt
llkygvheaifamlasivnkdgllvangsgfvtreflrslrkpfsdiiepkfefavkfna
lelddsdlalfiaaiilcgdrpglmnvprveaiqdtilralefhlqanhpdaqylfpkll
qkmadlrqlvtehaqmmqrikktetetslhpllqeiykdmy
Sequence, based on observed residues (ATOM records): (download)
>3sp9A (A:)
adlkafskhiynaylknfnmtkkkarsiltgkashtapfvihdietlwqaekglvwkqlv
nglppykeisvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvheaifa
mlasivnkdgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdlalfi
aaiilcgdrpglmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrqlvte
haqmmqrikktetetslhpllqeiykdmy
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3sp9B (B:)
hhhhhhlvprgsadlkafskhiynaylknfnmtkkkarsiltgkashtapfvihdietlw
qaekglvwkqlvnglppykeisvhvfyrcqcttvetvreltefaksipsfsslflndqvt
llkygvheaifamlasivnkdgllvangsgfvtreflrslrkpfsdiiepkfefavkfna
lelddsdlalfiaaiilcgdrpglmnvprveaiqdtilralefhlqanhpdaqylfpkll
qkmadlrqlvtehaqmmqrikktetetslhpllqeiykdmy
Sequence, based on observed residues (ATOM records): (download)
>3sp9B (B:)
adlkafskhiynaylknfnmtkkkarsiltgkhtapfvihdietlwqaekglvwkqlvng
lppykeisvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvheaifaml
asivnkdgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdlalfiaa
iilcgdrpglmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrqlvteha
qmmqrikktetetslhpllqeiykdmy