PDB entry 3slc

View 3slc on RCSB PDB site
Description: Crystal structure of apo form of acetate kinase (AckA) from Salmonella typhimurium
Class: Transferase
Keywords: Actin-like ATPase domain, ASKHA superfamily of phosphotransferase, Acetokinase, ATP binding, Phosphotransferase, Transferase
Deposited on 2011-06-24, released 2012-08-29
The last revision prior to the SCOPe 2.08 freeze date was dated 2012-10-31, with a file datestamp of 2012-10-26.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.224
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: acetate kinase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Gene: ackA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P63411 (15-414)
      • expression tag (14)
    Domains in SCOPe 2.08: d3slca1, d3slca2, d3slca3
  • Chain 'B':
    Compound: acetate kinase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Gene: ackA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3slcb1, d3slcb2
  • Chain 'C':
    Compound: acetate kinase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Gene: ackA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3slcc1, d3slcc2
  • Chain 'D':
    Compound: acetate kinase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Gene: ackA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3slcd1, d3slcd2
  • Heterogens: EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3slcA (A:)
mrgshhhhhhgmashmssklvlvlncgssslkfaiidavngdeylsglaecfhlpearik
wkmdgskqeaalgagaahsealnfivntilaqkpelsaqltaighrivhggekytssvvi
desviqgikdsasfaplhnpahligiaealksfpqlkdknvavfdtafhqtmpeesylya
lpyslykehgvrrygahgtshfyvtqeaakmlnkpveelniitchlgnggsvsairngkc
vdtsmgltpleglvmgtrsgdidpaiifhlhdtlgmsvdqinkmltkesgllgltevtsd
cryvednyatkedakramdvychrlakyigsytalmdgrldavvftggigenaamvrels
lgklgvlgfevdhernlaarfgksgfinkegtrpavviptneelviaqdasrlta

    Sequence, based on observed residues (ATOM records): (download) 
    >3slcA (A:)
hmssklvlvlncgssslkfaiidavngdeylsglaecfhlpearikwkmdgskqeaalga
gaahsealnfivntilaqkpelsaqltaighrivhggekytssvvidesviqgikdsasf
aplhnpahligiaealksfpqlkdknvavfdtafhqtmpeesylyalpyslykehgvrry
gahgtshfyvtqeaakmlnkpveelniitchlgnggsvsairngkcvdtsmgltpleglv
mgtrsgdidpaiifhlhdtlgmsvdqinkmltkesgllgltevtsdcryvednyatkeda
kramdvychrlakyigsytalmdgrldavvftggigenaamvrelslgklgvlgfevdhe
rnlaarfgksgfinkegtrpavviptneelviaqdasrlta

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3slcB (B:)
mrgshhhhhhgmashmssklvlvlncgssslkfaiidavngdeylsglaecfhlpearik
wkmdgskqeaalgagaahsealnfivntilaqkpelsaqltaighrivhggekytssvvi
desviqgikdsasfaplhnpahligiaealksfpqlkdknvavfdtafhqtmpeesylya
lpyslykehgvrrygahgtshfyvtqeaakmlnkpveelniitchlgnggsvsairngkc
vdtsmgltpleglvmgtrsgdidpaiifhlhdtlgmsvdqinkmltkesgllgltevtsd
cryvednyatkedakramdvychrlakyigsytalmdgrldavvftggigenaamvrels
lgklgvlgfevdhernlaarfgksgfinkegtrpavviptneelviaqdasrlta

    Sequence, based on observed residues (ATOM records): (download) 
    >3slcB (B:)
sklvlvlncgssslkfaiidavngdeylsglaecfhlpearikwkmdgskqeaalgagaa
hsealnfivntilaqkpelsaqltaighrivhggekytssvvidesviqgikdsasfapl
hnpahligiaealksfpqlkdknvavfdtafhqtmpeesylyalpyslykehgvrrygah
gtshfyvtqeaakmlnkpveelniitchlgnggsvsairngkcvdtsmgltpleglvmgt
rsgdidpaiifhlhdtlgmsvdqinkmltkesgllgltevtsdcryvednyatkedakra
mdvychrlakyigsytalmdgrldavvftggigenaamvrelslgklgvlgfevdhernl
aarfgksgfinkegtrpavviptneelviaqdasrlta

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3slcC (C:)
mrgshhhhhhgmashmssklvlvlncgssslkfaiidavngdeylsglaecfhlpearik
wkmdgskqeaalgagaahsealnfivntilaqkpelsaqltaighrivhggekytssvvi
desviqgikdsasfaplhnpahligiaealksfpqlkdknvavfdtafhqtmpeesylya
lpyslykehgvrrygahgtshfyvtqeaakmlnkpveelniitchlgnggsvsairngkc
vdtsmgltpleglvmgtrsgdidpaiifhlhdtlgmsvdqinkmltkesgllgltevtsd
cryvednyatkedakramdvychrlakyigsytalmdgrldavvftggigenaamvrels
lgklgvlgfevdhernlaarfgksgfinkegtrpavviptneelviaqdasrlta

    Sequence, based on observed residues (ATOM records): (download) 
    >3slcC (C:)
sklvlvlncgssslkfaiidavngdeylsglaecfhlpearikwkmdgskqeaallaqkp
elsaqltaighrivhggekytssvvidesviqgikdsasfaplhnpahligiaealksfp
qlkdknvavfdtafhqtmpeesylyalpyslykehgvrrygahgtshfyvtqeaakmlnk
pveelniitchlgnggsvsairngkcvdtsmgltpleglvmgtrsgdidpaiifhlhdtl
gmsvdqinkmltkesgllgltevtsdcryvednyatkedakramdvychrlakyigsyta
lmdgrldavvftggigenaamvrelslgklgvlgfevdhernlaarfgksgfinkegtrp
avviptneelviaqdasrlta

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3slcD (D:)
mrgshhhhhhgmashmssklvlvlncgssslkfaiidavngdeylsglaecfhlpearik
wkmdgskqeaalgagaahsealnfivntilaqkpelsaqltaighrivhggekytssvvi
desviqgikdsasfaplhnpahligiaealksfpqlkdknvavfdtafhqtmpeesylya
lpyslykehgvrrygahgtshfyvtqeaakmlnkpveelniitchlgnggsvsairngkc
vdtsmgltpleglvmgtrsgdidpaiifhlhdtlgmsvdqinkmltkesgllgltevtsd
cryvednyatkedakramdvychrlakyigsytalmdgrldavvftggigenaamvrels
lgklgvlgfevdhernlaarfgksgfinkegtrpavviptneelviaqdasrlta

    Sequence, based on observed residues (ATOM records): (download) 
    >3slcD (D:)
sklvlvlncgssslkfaiidavngdeylsglaecfhlpearikwkmdgskqeaalgagaa
hsealnfivntilaqkpelsaqltaighrivhggekytssvvidesviqgikdsasfapl
hnpahligiaealksfpqlkdknvavfdtafhqtmpeesylyalpyslykehgvrrygah
gtshfyvtqeaakmlnkpveelniitchlgnggsvsairngkcvdtsmgltpleglvmgt
rsgdidpaiifhlhdtlgmsvdqinkmltkesgllgltevtsdcryvednyatkedakra
mdvychrlakyigsytalmdgrldavvftggigenaamvrelslgklgvlgfevdhernl
aarfgksgfinkegtrpavviptneelviaqdasrlta