PDB entry 3sbt

View 3sbt on RCSB PDB site
Description: Crystal structure of a Aar2-Prp8 complex
Class: splicing
Keywords: RNaseH like domain, VHS like domain, U5 snRNP assembly, SPLICING
Deposited on 2011-06-06, released 2011-07-27
The last revision prior to the SCOPe 2.07 freeze date was dated 2013-02-20, with a file datestamp of 2013-02-15.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.164
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Pre-mRNA-splicing factor 8
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: DBF3, DNA39, PRP8, RNA8, SLT21, USA2, YHR165C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P33334 (3-End)
      • expression tag (1-2)
    Domains in SCOPe 2.07: d3sbta1, d3sbta2
  • Chain 'B':
    Compound: A1 cistron-splicing factor AAR2
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: AAR2, YBL06.06, YBL0611, YBL074C
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3sbtb1, d3sbtb2
  • Heterogens: SO4, PGO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3sbtA (A:)
gamnssnyaelfnndiklfvddtnvyrvtvhktfegnvatkaingciftlnpktghlflk
iihtsvwagqkrlsqlakwktaeevsalvrslpkeeqpkqiivtrkamldplevhmldfp
niairptelrlpfsaamsidklsdvvmkatepqmvlfniyddwldrissytafsrltlll
ralktneesakmillsdptitiksyhlwpsftdeqwitiesqmrdlilteygrkynvnis
altqteikdiilgqnikaps

    Sequence, based on observed residues (ATOM records): (download) 
    >3sbtA (A:)
amnssnyaelfnndiklfvddtnvyrvtvhktfegnvatkaingciftlnpktghlflki
ihtsvwagqkrlsqlakwktaeevsalvrslpkeeqpkqiivtrkamldplevhmldfpn
iairptelrlpfsaamsidklsdvvmkatepqmvlfniyddwldrissytafsrltlllr
alktneesakmillsdptitiksyhlwpsftdeqwitiesqmrdlilteygrkynvnisa
ltqteikdiilgq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3sbtB (B:)
mntvpftsapievtigidqysfnvkenqpfhgikdipighvhvihfqhadnssmrygywf
dcrmgnfyiqydpkdglykmmeerdgakfenivhnfkerqmmvsypkideddtwynltef
vqmdkirkivrkdenqfsyvdssmttvqenellksslqkagskmeakneddpahslnytv
infksreairpghemedfldksyylntvmlqgifknssnyfgelqfaflnamffgnygss
lqwhamielicssatvpkhmldkldeilyyqiktlpeqysdillnervwniclyssfqkn
slhntekimenkypellgkdneddaliygisdeerddeddehnptivgglyyqrplehhh
hhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3sbtB (B:)
mntvpftsapievtigidqysfnvkenqpfhgikdipighvhvihfqhadnssmrygywf
dcrmgnfyiqydpkdglykmmeerdgakfenivhnfkerqmmvsypkideddtwynltef
vqmdkirkivrkdenqfsyvdssmttvqenelldpahslnytvinfksreairpghemed
fldksyylntvmlqgifknssnyfgelqfaflnamffgnygsslqwhamielicssatvp
khmldkldeilyyqiktlpeqysdillnervwniclyssfqknslhntekimenkypell