PDB entry 3sbf

View 3sbf on RCSB PDB site
Description: Crystal structure of the mutant P311A of enolase superfamily member from VIBRIONALES BACTERIUM complexed with Mg and D-Arabinonate
Class: isomerase
Keywords: enolase fold, acid sugar dehydratase, D-Araninonate, ISOMERASE
Deposited on 2011-06-04, released 2012-06-06
The last revision prior to the SCOPe 2.05 freeze date was dated 2012-06-13, with a file datestamp of 2012-06-08.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: 0.181
AEROSPACI score: 0.63 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Mandelate racemase / muconate lactonizing enzyme
    Species: Vibrionales bacterium SWAT-3 [TaxId:391574]
    Gene: VSWAT3_13707
    Database cross-references and differences (RAF-indexed):
    • Uniprot A5KUH4 (Start-400)
      • engineered mutation (310)
    Domains in SCOPe 2.05: d3sbfa1, d3sbfa2
  • Chain 'B':
    Compound: Mandelate racemase / muconate lactonizing enzyme
    Species: Vibrionales bacterium SWAT-3 [TaxId:391574]
    Gene: VSWAT3_13707
    Database cross-references and differences (RAF-indexed):
    • Uniprot A5KUH4 (3-400)
      • engineered mutation (310)
    Domains in SCOPe 2.05: d3sbfb1, d3sbfb2
  • Chain 'C':
    Compound: Mandelate racemase / muconate lactonizing enzyme
    Species: Vibrionales bacterium SWAT-3 [TaxId:391574]
    Gene: VSWAT3_13707
    Database cross-references and differences (RAF-indexed):
    • Uniprot A5KUH4 (Start-400)
      • engineered mutation (310)
    Domains in SCOPe 2.05: d3sbfc1, d3sbfc2
  • Chain 'D':
    Compound: Mandelate racemase / muconate lactonizing enzyme
    Species: Vibrionales bacterium SWAT-3 [TaxId:391574]
    Gene: VSWAT3_13707
    Database cross-references and differences (RAF-indexed):
    • Uniprot A5KUH4 (3-400)
      • expression tag (2)
      • engineered mutation (310)
    Domains in SCOPe 2.05: d3sbfd1, d3sbfd2
  • Heterogens: MG, EPE, D8T, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3sbfA (A:)
mslketiisdihciitkpdrhnlitvvvetnegvtgfgcatfqqrplavktmvdeylkpi
ligknanniedlwqmmmvnaywrngpvinnaisgvdmalwdikaklagmplhqlfggksr
daipvythatsdtmegiydlvegflekgykhircqlgfyggvptdlhttqnptegsyydq
dqymdntltmfkslrekygnqfhilhdvherlfpnqaiqfakeveqykpyfiedilppnq
tewldnirsqssvslglgelfnnpeewkslianrridfirchvsqiggitpalklghlcq
nfgvriawhcapdmtpigaavnthlnvhlhnaaiqehveyngnthkvfpnaaepingyly
aseiagigveidreaaaefpvmyrphewtqsrlpdgaihtp

    Sequence, based on observed residues (ATOM records): (download) 
    >3sbfA (A:)
etiisdihciitkpdrhnlitvvvetnegvtgfgcatfqqrplavktmvdeylkpiligk
nanniedlwqmmmvnaywrngpvinnaisgvdmalwdikaklagmplhqlfggksrdaip
vythatsdtmegiydlvegflekgykhircqlgfyggvptdlhttqnptegsyydqdqym
dntltmfkslrekygnqfhilhdvherlfpnqaiqfakeveqykpyfiedilppnqtewl
dnirsqssvslglgelfnnpeewkslianrridfirchvsqiggitpalklghlcqnfgv
riawhcapdmtpigaavnthlnvhlhnaaiqehveyngnthkvfpnaaepingylyasei
agigveidreaaaefpvmyrphewtqsrlpdgaihtp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3sbfB (B:)
mslketiisdihciitkpdrhnlitvvvetnegvtgfgcatfqqrplavktmvdeylkpi
ligknanniedlwqmmmvnaywrngpvinnaisgvdmalwdikaklagmplhqlfggksr
daipvythatsdtmegiydlvegflekgykhircqlgfyggvptdlhttqnptegsyydq
dqymdntltmfkslrekygnqfhilhdvherlfpnqaiqfakeveqykpyfiedilppnq
tewldnirsqssvslglgelfnnpeewkslianrridfirchvsqiggitpalklghlcq
nfgvriawhcapdmtpigaavnthlnvhlhnaaiqehveyngnthkvfpnaaepingyly
aseiagigveidreaaaefpvmyrphewtqsrlpdgaihtp

    Sequence, based on observed residues (ATOM records): (download) 
    >3sbfB (B:)
ketiisdihciitkpdrhnlitvvvetnegvtgfgcatfqqrplavktmvdeylkpilig
knanniedlwqmmmvnaywrngpvinnaisgvdmalwdikaklagmplhqlfggksrdai
pvythatsdtmegiydlvegflekgykhircqlglhttqnptegsyydqdqymdntltmf
kslrekygnqfhilhdvherlfpnqaiqfakeveqykpyfiedilppnqtewldnirsqs
svslglgelfnnpeewkslianrridfirchvsqiggitpalklghlcqnfgvriawhca
pdmtpigaavnthlnvhlhnaaiqehveyngnthkvfpnaaepingylyaseiagigvei
dreaaaefpvmyrphewtqsrlpdgaihtp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3sbfC (C:)
mslketiisdihciitkpdrhnlitvvvetnegvtgfgcatfqqrplavktmvdeylkpi
ligknanniedlwqmmmvnaywrngpvinnaisgvdmalwdikaklagmplhqlfggksr
daipvythatsdtmegiydlvegflekgykhircqlgfyggvptdlhttqnptegsyydq
dqymdntltmfkslrekygnqfhilhdvherlfpnqaiqfakeveqykpyfiedilppnq
tewldnirsqssvslglgelfnnpeewkslianrridfirchvsqiggitpalklghlcq
nfgvriawhcapdmtpigaavnthlnvhlhnaaiqehveyngnthkvfpnaaepingyly
aseiagigveidreaaaefpvmyrphewtqsrlpdgaihtp

    Sequence, based on observed residues (ATOM records): (download) 
    >3sbfC (C:)
etiisdihciitkpdrhnlitvvvetnegvtgfgcatfqqrplavktmvdeylkpiligk
nanniedlwqmmmvnaywrngpvinnaisgvdmalwdikaklagmplhqlfggksrdaip
vythatsdtmegiydlvegflekgykhircqlgfyggvptdlhttqnptegsyydqdqym
dntltmfkslrekygnqfhilhdvherlfpnqaiqfakeveqykpyfiedilppnqtewl
dnirsqssvslglgelfnnpeewkslianrridfirchvsqiggitpalklghlcqnfgv
riawhcapdmtpigaavnthlnvhlhnaaiqehveyngnthkvfpnaaepingylyasei
agigveidreaaaefpvmyrphewtqsrlpdgaihtp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3sbfD (D:)
mslketiisdihciitkpdrhnlitvvvetnegvtgfgcatfqqrplavktmvdeylkpi
ligknanniedlwqmmmvnaywrngpvinnaisgvdmalwdikaklagmplhqlfggksr
daipvythatsdtmegiydlvegflekgykhircqlgfyggvptdlhttqnptegsyydq
dqymdntltmfkslrekygnqfhilhdvherlfpnqaiqfakeveqykpyfiedilppnq
tewldnirsqssvslglgelfnnpeewkslianrridfirchvsqiggitpalklghlcq
nfgvriawhcapdmtpigaavnthlnvhlhnaaiqehveyngnthkvfpnaaepingyly
aseiagigveidreaaaefpvmyrphewtqsrlpdgaihtp

    Sequence, based on observed residues (ATOM records): (download) 
    >3sbfD (D:)
lketiisdihciitkpdrhnlitvvvetnegvtgfgcatfqqrplavktmvdeylkpili
gknanniedlwqmmmvnaywrngpvinnaisgvdmalwdikaklagmplhqlfggksrda
ipvythatsdtmegiydlvegflekgykhircqlgfyggvptdlhttqnptegsyydqdq
ymdntltmfkslrekygnqfhilhdvherlfpnqaiqfakeveqykpyfiedilppnqte
wldnirsqssvslglgelfnnpeewkslianrridfirchvsqiggitpalklghlcqnf
gvriawhcapdmtpigaavnthlnvhlhnaaiqehveyngnthkvfpnaaepingylyas
eiagigveidreaaaefpvmyrphewtqsrlpdgaihtp