PDB entry 3s13
View 3s13 on RCSB PDB site
Description: Crystal structure of H5N1 influenza virus hemagglutinin, strain YU562 crystal form 2
Class: viral protein
Keywords: hemagglutinin, viral protein, viral envelope protein, viral fusion protein
Deposited on
2011-05-14, released
2011-12-14
The last revision prior to the SCOPe 2.06 freeze date was dated
2012-03-28, with a file datestamp of
2012-03-23.
Experiment type: XRAY
Resolution: 2.96 Å
R-factor: 0.239
AEROSPACI score: 0.21
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Hemagglutinin HA1 chain
Species: Influenza A virus [TaxId:196426]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3s13a_ - Chain 'B':
Compound: Hemagglutinin HA2 chain
Species: Influenza A virus [TaxId:196426]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Heterogens: SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3s13A (A:)
dlgsmadpgylledqicigyhannsteqvdtimeknvtvthaqdilekthngklcdldgv
kplilrdcsvagwllgnpmcdefinvpewsyivekaspandlcypgdfndyeelkhllsr
inhfekiqiipksswsnheassgvssacpylgkssffrnvvwlikknsayptikrsynnt
nqedllvlwgihhpndaaeqtklyqnpttyisvgtstlnqrlvpkiatrskvngqsgrme
ffwtilkpndainfesngnfiapeyaykivkkgdsaimkseleygncntkcqtpmgains
smpfhnihpltigecpkyvksnrlvlatglrntpqr
Sequence, based on observed residues (ATOM records): (download)
>3s13A (A:)
lekthngklcdldgvkplilrdcsvagwllgnpmcdefinvpewsyivekaspandlcyp
gdfndyeelkhllsrinhfekiqiipksswsnheassgvssacpylgkssffrnvvwlik
knsayptikrsynntnqedllvlwgihhpndaaeqtklyqnpttyisvgtstlnqrlvpk
iatrskvngqsgrmeffwtilkpndainfesngnfiapeyaykivkkgdsaimkseleyg
ncntkcqtpmgainssmpfhnihpltigecpkyvksn
- Chain 'B':
No sequence available.