PDB entry 3ruf

View 3ruf on RCSB PDB site
Description: Alternative analogs as viable substrates of UDP-hexose 4-epimerases
Class: isomerase
Keywords: Rossmann fold, UDP-hexose 4-epimerase, ISOMERASE
Deposited on 2011-05-05, released 2011-05-25
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-05-25, with a file datestamp of 2011-05-20.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.206
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: WbgU
    Species: Plesiomonas shigelloides [TaxId:703]
    Gene: wbgU
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rufa_
  • Chain 'B':
    Compound: WbgU
    Species: Plesiomonas shigelloides [TaxId:703]
    Gene: wbgU
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rufb_
  • Chain 'S':
    Compound: WbgU
    Species: Plesiomonas shigelloides [TaxId:703]
    Gene: wbgU
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rufs_
  • Chain 'b':
    Compound: WbgU
    Species: Plesiomonas shigelloides [TaxId:703]
    Gene: wbgU
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAD, UDP, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3rufA (A:)
hhhhhhmdiymsryeeitqqlifspktwlitgvagfigsnllekllklnqvvigldnfst
ghqynldevktlvsteqwsrfcfiegdirdlttceqvmkgvdhvlhqaalgsvprsivdp
ittnatnitgflnilhaaknaqvqsftyaassstygdhpalpkveenignplspyavtky
vneiyaqvyartygfktiglryfnvfgrrqdpngayaavipkwtaamlkgddvyingdge
tsrdfcyidnviqmnilsalakdsakdniynvavgdrttlnelsgyiydelnlihhidkl
sikyrefrsgdvrhsqadvtkaidllkyrpnikireglrlsmpwyvrflkg

    Sequence, based on observed residues (ATOM records): (download) 
    >3rufA (A:)
ymsryeeitqqlifspktwlitgvagfigsnllekllklnqvvigldnfstghqynldev
ktlvsteqwsrfcfiegdirdlttceqvmkgvdhvlhqaalgsvprsivdpittnatnit
gflnilhaaknaqvqsftyaassstygdhpalpkveenignplspyavtkyvneiyaqvy
artygfktiglryfnvfgrrqdpngayaavipkwtaamlkgddvyingdgetsrdfcyid
nviqmnilsalakdsakdniynvavgdrttlnelsgyiydelnlihhikyrefrsgdvrh
sqadvtkaidllkyrpnikireglrlsmpwyvrflk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3rufB (B:)
hhhhhhmdiymsryeeitqqlifspktwlitgvagfigsnllekllklnqvvigldnfst
ghqynldevktlvsteqwsrfcfiegdirdlttceqvmkgvdhvlhqaalgsvprsivdp
ittnatnitgflnilhaaknaqvqsftyaassstygdhpalpkveenignplspyavtky
vneiyaqvyartygfktiglryfnvfgrrqdpngayaavipkwtaamlkgddvyingdge
tsrdfcyidnviqmnilsalakdsakdniynvavgdrttlnelsgyiydelnlihhidkl
sikyrefrsgdvrhsqadvtkaidllkyrpnikireglrlsmpwyvrflkg

    Sequence, based on observed residues (ATOM records): (download) 
    >3rufB (B:)
ymsryeeitqqlifspktwlitgvagfigsnllekllklnqvvigldnfstghqynldev
ktlvsteqwsrfcfiegdirdlttceqvmkgvdhvlhqaalgsvprsivdpittnatnit
gflnilhaaknaqvqsftyaassstygdhpalpkveenignplspyavtkyvneiyaqvy
artygfktiglryfnvfgrrqdpngayaavipkwtaamlkgddvyingdgetsrdfcyid
nviqmnilsalakdsakdniynvavgdrttlnelsgyiydelnlihhikyrefrsgdvrh
sqadvtkaidllkyrpnikireglrlsmpwyvrflk

  • Chain 'S':
    Sequence, based on SEQRES records: (download) 
    >3rufS (S:)
hhhhhhmdiymsryeeitqqlifspktwlitgvagfigsnllekllklnqvvigldnfst
ghqynldevktlvsteqwsrfcfiegdirdlttceqvmkgvdhvlhqaalgsvprsivdp
ittnatnitgflnilhaaknaqvqsftyaassstygdhpalpkveenignplspyavtky
vneiyaqvyartygfktiglryfnvfgrrqdpngayaavipkwtaamlkgddvyingdge
tsrdfcyidnviqmnilsalakdsakdniynvavgdrttlnelsgyiydelnlihhidkl
sikyrefrsgdvrhsqadvtkaidllkyrpnikireglrlsmpwyvrflkg

    Sequence, based on observed residues (ATOM records): (download) 
    >3rufS (S:)
ymsryeeitqqlifspktwlitgvagfigsnllekllklnqvvigldnfstghqynldev
ktlvsteqwsrfcfiegdirdlttceqvmkgvdhvlhqaalgsvprsivdpittnatnit
gflnilhaaknaqvqsftyaassstygdhpalpkveenignplspyavtkyvneiyaqvy
artygfktiglryfnvfgrrqdpngayaavipkwtaamlkgddvyingdgetsrdfcyid
nviqmnilsalakdsakdniynvavgdrttlnelsgyiydelnlihhikyrefrsgdvrh
sqadvtkaidllkyrpnikireglrlsmpwyvrflk

  • Chain 'b':
    No sequence available.