PDB entry 3rud

View 3rud on RCSB PDB site
Description: Alternative analogs as viable substrates of UDP-hexose 4-epimerases
Class: isomerase
Keywords: Rossmann fold, UDP-hexose 4-epimerase, ISOMERASE
Deposited on 2011-05-05, released 2011-05-25
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-01-24, with a file datestamp of 2018-01-19.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: WbgU
    Species: Plesiomonas shigelloides [TaxId:703]
    Gene: wbgU
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3ruda_
  • Chain 'B':
    Compound: WbgU
    Species: Plesiomonas shigelloides [TaxId:703]
    Gene: wbgU
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rudb_
  • Chain 'C':
    Compound: WbgU
    Species: Plesiomonas shigelloides [TaxId:703]
    Gene: wbgU
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rudc_
  • Chain 'D':
    Compound: WbgU
    Species: Plesiomonas shigelloides [TaxId:703]
    Gene: wbgU
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rudd_
  • Heterogens: NAD, UNL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3rudA (A:)
hhhhhhmdiymsryeeitqqlifspktwlitgvagfigsnllekllklnqvvigldnfst
ghqynldevktlvsteqwsrfcfiegdirdlttceqvmkgvdhvlhqaalgsvprsivdp
ittnatnitgflnilhaaknaqvqsftyaassstygdhpalpkveenignplspyavtky
vneiyaqvyartygfktiglryfnvfgrrqdpngayaavipkwtaamlkgddvyingdge
tsrdfcyidnviqmnilsalakdsakdniynvavgdrttlnelsgyiydelnlihhidkl
sikyrefrsgdvrhsqadvtkaidllkyrpnikireglrlsmpwyvrflkg

    Sequence, based on observed residues (ATOM records): (download) 
    >3rudA (A:)
ymsryeeitqqlifspktwlitgvagfigsnllekllklnqvvigldnfstghqynldev
ktlvsteqwsrfcfiegdirdlttceqvmkgvdhvlhqaalgsvprsivdpittnatnit
gflnilhaaknaqvqsftyaassstygdhpalpkveenignplspyavtkyvneiyaqvy
artygfktiglryfnvfgrrqdpngayaavipkwtaamlkgddvyingdgetsrdfcyid
nviqmnilsalakdsakdniynvavgdrttlnelsgyiydelnlihhikyrefrsgdvrh
sqadvtkaidllkyrpnikireglrlsmpwyvrflk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3rudB (B:)
hhhhhhmdiymsryeeitqqlifspktwlitgvagfigsnllekllklnqvvigldnfst
ghqynldevktlvsteqwsrfcfiegdirdlttceqvmkgvdhvlhqaalgsvprsivdp
ittnatnitgflnilhaaknaqvqsftyaassstygdhpalpkveenignplspyavtky
vneiyaqvyartygfktiglryfnvfgrrqdpngayaavipkwtaamlkgddvyingdge
tsrdfcyidnviqmnilsalakdsakdniynvavgdrttlnelsgyiydelnlihhidkl
sikyrefrsgdvrhsqadvtkaidllkyrpnikireglrlsmpwyvrflkg

    Sequence, based on observed residues (ATOM records): (download) 
    >3rudB (B:)
ymsryeeitqqlifspktwlitgvagfigsnllekllklnqvvigldnfstghqynldev
ktlvsteqwsrfcfiegdirdlttceqvmkgvdhvlhqaalgsvprsivdpittnatnit
gflnilhaaknaqvqsftyaassstygdhpalpkveenignplspyavtkyvneiyaqvy
artygfktiglryfnvfgrrqdpngayaavipkwtaamlkgddvyingdgetsrdfcyid
nviqmnilsalakdsakdniynvavgdrttlnelsgyiydelnlihhikyrefrsgdvrh
sqadvtkaidllkyrpnikireglrlsmpwyvrflk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3rudC (C:)
hhhhhhmdiymsryeeitqqlifspktwlitgvagfigsnllekllklnqvvigldnfst
ghqynldevktlvsteqwsrfcfiegdirdlttceqvmkgvdhvlhqaalgsvprsivdp
ittnatnitgflnilhaaknaqvqsftyaassstygdhpalpkveenignplspyavtky
vneiyaqvyartygfktiglryfnvfgrrqdpngayaavipkwtaamlkgddvyingdge
tsrdfcyidnviqmnilsalakdsakdniynvavgdrttlnelsgyiydelnlihhidkl
sikyrefrsgdvrhsqadvtkaidllkyrpnikireglrlsmpwyvrflkg

    Sequence, based on observed residues (ATOM records): (download) 
    >3rudC (C:)
ymsryeeitqqlifspktwlitgvagfigsnllekllklnqvvigldnfstghqynldev
ktlvsteqwsrfcfiegdirdlttceqvmkgvdhvlhqaalgsvprsivdpittnatnit
gflnilhaaknaqvqsftyaassstygdhpalpkveenignplspyavtkyvneiyaqvy
artygfktiglryfnvfgrrqdpngayaavipkwtaamlkgddvyingdgetsrdfcyid
nviqmnilsalakdsakdniynvavgdrttlnelsgyiydelnlihhikyrefrsgdvrh
sqadvtkaidllkyrpnikireglrlsmpwyvrflk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3rudD (D:)
hhhhhhmdiymsryeeitqqlifspktwlitgvagfigsnllekllklnqvvigldnfst
ghqynldevktlvsteqwsrfcfiegdirdlttceqvmkgvdhvlhqaalgsvprsivdp
ittnatnitgflnilhaaknaqvqsftyaassstygdhpalpkveenignplspyavtky
vneiyaqvyartygfktiglryfnvfgrrqdpngayaavipkwtaamlkgddvyingdge
tsrdfcyidnviqmnilsalakdsakdniynvavgdrttlnelsgyiydelnlihhidkl
sikyrefrsgdvrhsqadvtkaidllkyrpnikireglrlsmpwyvrflkg

    Sequence, based on observed residues (ATOM records): (download) 
    >3rudD (D:)
ymsryeeitqqlifspktwlitgvagfigsnllekllklnqvvigldnfstghqynldev
ktlvsteqwsrfcfiegdirdlttceqvmkgvdhvlhqaalgsvprsivdpittnatnit
gflnilhaaknaqvqsftyaassstygdhpalpkveenignplspyavtkyvneiyaqvy
artygfktiglryfnvfgrrqdpngayaavipkwtaamlkgddvyingdgetsrdfcyid
nviqmnilsalakdsakdniynvavgdrttlnelsgyiydelnlihhikyrefrsgdvrh
sqadvtkaidllkyrpnikireglrlsmpwyvrflk