PDB entry 3rtd

View 3rtd on RCSB PDB site
Description: Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima soaked with NADH and ADP.
Class: lyase
Keywords: Unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydratase, LYASE
Deposited on 2011-05-03, released 2011-06-22
The last revision prior to the SCOPe 2.08 freeze date was dated 2012-10-31, with a file datestamp of 2012-10-26.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.167
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative uncharacterized protein
    Species: THERMOTOGA MARITIMA [TaxId:243274]
    Gene: tm0922, TM_0922
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3rtda1, d3rtda2
  • Chain 'B':
    Compound: Unknown peptide, probably from expression host
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • PDB 3RTD (0-6)
  • Heterogens: K, MG, NAI, ADP, NAX, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3rtdA (A:)
mgsdkihhhhhhmkeideltikeygvdsrilmeragisvvlameeelgnlsdyrflvlcg
ggnnggdgfvvarnllgvvkdvlvvflgkkktpdceynyglykkfggkvveqfepsilne
fdvvvdaifgtglrgeitgeyaeiinlvnksgkvvvsvdvpsgidsntgkvlrtavkadl
tvtfgvpkighilfpgrdltgklkvanighpvhlinsinryvitremvrsllperprdsh
kgtygkvliiagsrlysgapvlsgmgslkvgtglvklavpfpqnliatsrfpelisvpid
tekgffslqnlqeclelskdvdvvaigpglgnnehvrefvneflktlekpavidadainv
ldtsvlkerkspavltphpgemarlvkktvgdvkynyelaeefakendcvlvlksattiv
tdgektlfnitgntglskggsgdvltgmiagfiaqglspleastvsvylhgfaaelfeqd
ergltasellrlipeairrlke

    Sequence, based on observed residues (ATOM records): (download) 
    >3rtdA (A:)
mkeideltikeygvdsrilmeragisvvlameeelgnlsdyrflvlcgggnnggdgfvva
rnllgvvkdvlvvflgkkktpdceynyglykkfggkvveqfepsilnefdvvvdaifgtg
lrgeitgeyaeiinlvnksgkvvvsvdvpsgidsntgkvlrtavkadltvtfgvpkighi
lfpgrdltgklkvanighpvhlinsinryvitremvrsllperprdshkgtygkvliiag
srlysgapvlsgmgslkvgtglvklavpfpqnliatsrfpelisvpidtekgffslqnlq
eclelskdvdvvaigpglgnnehvrefvneflktlekpavidadainvldtsvlkerksp
avltphpgemarlvkktvgdvkynyelaeefakendcvlvlksattivtdgektlfnitg
ntglskggsgdvltgmiagfiaqglspleastvsvylhgfaaelfeqdergltasellrl
ipeairrlk

  • Chain 'B':
    No sequence available.