SCOPe 2.08: Structural Classification of Proteins

PDB entry 3rqv

View 3rqv on RCSB PDB site
Description: 1.45 Angstrom Structure of STNV coat protein (half of the capsid, the other half in PDB 1VTZ)
Class: virus
Keywords: jelly-roll beta-sandwich, virus, coat protein
Deposited on 2011-04-28, released 2011-08-03
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-12-10, with a file datestamp of 2014-12-05.
Experiment type: XRAY
Resolution: 1.45 Å
R-factor: 0.176
AEROSPACI score: 0.57 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqva_
Chain 'B':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvb_
Chain 'C':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvc_
Chain 'D':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvd_
Chain 'E':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqve_
Chain 'F':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvf_
Chain 'G':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvg_
Chain 'H':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvh_
Chain 'I':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvi_
Chain 'J':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvj_
Chain 'K':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvk_
Chain 'L':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvl_
Chain 'M':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvm_
Chain 'N':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvn_
Chain 'O':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvo_
Chain 'P':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvp_
Chain 'Q':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvq_
Chain 'R':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvr_
Chain 'S':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvs_
Chain 'T':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvt_
Chain 'U':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvu_
Chain 'V':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvv_
Chain 'W':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvw_
Chain 'X':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvx_
Chain 'Y':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvy_
Chain 'Z':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Domains in SCOPe 2.08: d3rqvz_
Chain 'a':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Chain 'b':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Chain 'c':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Chain 'd':
Compound: coat protein
Species: Tobacco necrosis satellite virus 1 [TaxId:12445]
Database cross-references and differences (RAF-indexed):
- Uniprot P03606 (Start-195)
Heterogens: CA, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>3rqvA (A:)
makqqnnrrksatmravkrminthlehkrfalinsgntnatagtvqnlsngiiqgddinq
rsgdqvrivshklhvrgtaitvsqtfrfiwfrdnmnrgttptvlevlntanfmsqynpit
lqqkrftilkdvtlncsltgesikdriinlpgqlvnyngatavaasngpgaifmlqigds
lvglwdssyeavytda